Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.24■□□□□ 0.35
USP11P51784 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.24■□□□□ 0.35
USP11P51784 CNN2P8-201ENST00000421872 913 ntBASIC17.24■□□□□ 0.35
USP11P51784 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.24■□□□□ 0.35
USP11P51784 CROCCP4-201ENST00000457096 498 ntBASIC17.24■□□□□ 0.35
USP11P51784 ACA64.2-201ENST00000459014 129 ntBASIC17.24■□□□□ 0.35
USP11P51784 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP11P51784 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP11P51784 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
USP11P51784 AP000812.2-201ENST00000538934 718 ntBASIC17.24■□□□□ 0.35
USP11P51784 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.24■□□□□ 0.35
USP11P51784 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
USP11P51784 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP11P51784 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP11P51784 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP11P51784 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
USP11P51784 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
USP11P51784 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.24■□□□□ 0.35
USP11P51784 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.24■□□□□ 0.35
USP11P51784 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
USP11P51784 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP11P51784 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP11P51784 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP11P51784 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.24■□□□□ 0.35
USP11P51784 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP11P51784 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP11P51784 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP11P51784 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.23■□□□□ 0.35
USP11P51784 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP11P51784 AC055811.4-201ENST00000624039 1754 ntBASIC17.23■□□□□ 0.35
USP11P51784 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP11P51784 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP11P51784 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
USP11P51784 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP11P51784 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP11P51784 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP11P51784 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP11P51784 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.23■□□□□ 0.35
USP11P51784 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
USP11P51784 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.23■□□□□ 0.35
USP11P51784 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP11P51784 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.23■□□□□ 0.35
USP11P51784 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP11P51784 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.23■□□□□ 0.35
USP11P51784 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.23■□□□□ 0.35
USP11P51784 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.23■□□□□ 0.35
USP11P51784 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
USP11P51784 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.23■□□□□ 0.35
USP11P51784 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.23■□□□□ 0.35
USP11P51784 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP11P51784 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.23■□□□□ 0.35
USP11P51784 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
USP11P51784 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.23■□□□□ 0.35
USP11P51784 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP11P51784 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.23■□□□□ 0.35
USP11P51784 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP11P51784 AC006058.4-201ENST00000624016 1670 ntBASIC17.23■□□□□ 0.35
USP11P51784 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP11P51784 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP11P51784 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP11P51784 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP11P51784 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.22■□□□□ 0.35
USP11P51784 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP11P51784 ACE3P-201ENST00000423435 1973 ntBASIC17.22■□□□□ 0.35
USP11P51784 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.22■□□□□ 0.35
USP11P51784 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP11P51784 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP11P51784 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.22■□□□□ 0.35
USP11P51784 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP11P51784 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
USP11P51784 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
USP11P51784 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP11P51784 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP11P51784 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP11P51784 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
USP11P51784 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP11P51784 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP11P51784 OR8S1-201ENST00000310194 1080 ntBASIC17.22■□□□□ 0.35
USP11P51784 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP11P51784 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.22■□□□□ 0.35
USP11P51784 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
USP11P51784 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.22■□□□□ 0.35
USP11P51784 ARSEP1-201ENST00000420443 635 ntBASIC17.22■□□□□ 0.35
USP11P51784 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP11P51784 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP11P51784 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.22■□□□□ 0.35
USP11P51784 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.22■□□□□ 0.35
USP11P51784 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP11P51784 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
USP11P51784 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
USP11P51784 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.22■□□□□ 0.35
USP11P51784 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.22■□□□□ 0.35
USP11P51784 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP11P51784 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.22■□□□□ 0.35
USP11P51784 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.22■□□□□ 0.35
USP11P51784 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.22■□□□□ 0.35
USP11P51784 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP11P51784 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP11P51784 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.22■□□□□ 0.35
USP11P51784 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms