Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM4SF4P48230 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TM4SF4P48230 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.02■□□□□ 0.32
TM4SF4P48230 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TM4SF4P48230 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TM4SF4P48230 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
TM4SF4P48230 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TM4SF4P48230 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TM4SF4P48230 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TM4SF4P48230 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TM4SF4P48230 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TM4SF4P48230 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TM4SF4P48230 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TM4SF4P48230 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TM4SF4P48230 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TM4SF4P48230 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TM4SF4P48230 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TM4SF4P48230 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17.02■□□□□ 0.32
TM4SF4P48230 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC17.02■□□□□ 0.32
TM4SF4P48230 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TM4SF4P48230 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TM4SF4P48230 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TM4SF4P48230 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC17.02■□□□□ 0.32
TM4SF4P48230 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
TM4SF4P48230 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC17.02■□□□□ 0.32
TM4SF4P48230 HERC2P11-201ENST00000562845 725 ntBASIC17.02■□□□□ 0.32
TM4SF4P48230 AC100756.2-201ENST00000569537 736 ntBASIC17.02■□□□□ 0.32
TM4SF4P48230 AC007952.4-201ENST00000573866 637 ntBASIC17.02■□□□□ 0.32
TM4SF4P48230 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
TM4SF4P48230 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.02■□□□□ 0.32
TM4SF4P48230 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TM4SF4P48230 AC112504.1-201ENST00000623415 1841 ntBASIC17.02■□□□□ 0.31
TM4SF4P48230 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TM4SF4P48230 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TM4SF4P48230 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TM4SF4P48230 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.02■□□□□ 0.31
TM4SF4P48230 AC011676.5-201ENST00000624864 2660 ntBASIC17.02■□□□□ 0.31
TM4SF4P48230 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.02■□□□□ 0.31
TM4SF4P48230 ZBED1P1-201ENST00000502364 1930 ntBASIC17.02■□□□□ 0.31
TM4SF4P48230 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM4SF4P48230 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.01■□□□□ 0.31
TM4SF4P48230 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.01■□□□□ 0.31
TM4SF4P48230 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM4SF4P48230 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.01■□□□□ 0.31
TM4SF4P48230 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.01■□□□□ 0.31
TM4SF4P48230 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
TM4SF4P48230 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC17.01■□□□□ 0.31
TM4SF4P48230 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC17.01■□□□□ 0.31
TM4SF4P48230 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM4SF4P48230 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TM4SF4P48230 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TM4SF4P48230 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC17.01■□□□□ 0.31
TM4SF4P48230 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TM4SF4P48230 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC17.01■□□□□ 0.31
TM4SF4P48230 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC17.01■□□□□ 0.31
TM4SF4P48230 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC17.01■□□□□ 0.31
TM4SF4P48230 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC17.01■□□□□ 0.31
TM4SF4P48230 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC17.01■□□□□ 0.31
TM4SF4P48230 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC17.01■□□□□ 0.31
TM4SF4P48230 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.01■□□□□ 0.31
TM4SF4P48230 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC17.01■□□□□ 0.31
TM4SF4P48230 AC138701.2-201ENST00000553634 226 ntBASIC17.01■□□□□ 0.31
TM4SF4P48230 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.01■□□□□ 0.31
TM4SF4P48230 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC17.01■□□□□ 0.31
TM4SF4P48230 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
TM4SF4P48230 AC007250.1-201ENST00000608934 338 ntBASIC17.01■□□□□ 0.31
TM4SF4P48230 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM4SF4P48230 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM4SF4P48230 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM4SF4P48230 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TM4SF4P48230 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.01■□□□□ 0.31
TM4SF4P48230 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TM4SF4P48230 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.01■□□□□ 0.31
TM4SF4P48230 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.01■□□□□ 0.31
TM4SF4P48230 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TM4SF4P48230 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
TM4SF4P48230 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17■□□□□ 0.31
TM4SF4P48230 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
TM4SF4P48230 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TM4SF4P48230 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17■□□□□ 0.31
TM4SF4P48230 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17■□□□□ 0.31
TM4SF4P48230 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17■□□□□ 0.31
TM4SF4P48230 MRPL37P1-201ENST00000592451 1337 ntBASIC17■□□□□ 0.31
TM4SF4P48230 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC17■□□□□ 0.31
TM4SF4P48230 REXO1L4P-201ENST00000605109 1937 ntBASIC17■□□□□ 0.31
TM4SF4P48230 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TM4SF4P48230 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TM4SF4P48230 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TM4SF4P48230 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TM4SF4P48230 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC17■□□□□ 0.31
TM4SF4P48230 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC17■□□□□ 0.31
TM4SF4P48230 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TM4SF4P48230 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TM4SF4P48230 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC17■□□□□ 0.31
TM4SF4P48230 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17■□□□□ 0.31
TM4SF4P48230 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC17■□□□□ 0.31
TM4SF4P48230 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
TM4SF4P48230 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17■□□□□ 0.31
TM4SF4P48230 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC17■□□□□ 0.31
TM4SF4P48230 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms