Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
MTHFRP42898 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MTHFRP42898 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MTHFRP42898 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MTHFRP42898 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MTHFRP42898 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.99■□□□□ 0.15
MTHFRP42898 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.99■□□□□ 0.15
MTHFRP42898 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MTHFRP42898 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MTHFRP42898 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MTHFRP42898 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MTHFRP42898 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.99■□□□□ 0.15
MTHFRP42898 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MTHFRP42898 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MTHFRP42898 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.99■□□□□ 0.15
MTHFRP42898 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.99■□□□□ 0.15
MTHFRP42898 RN7SL774P-201ENST00000577467 290 ntBASIC15.99■□□□□ 0.15
MTHFRP42898 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.99■□□□□ 0.15
MTHFRP42898 OR10B1P-201ENST00000601666 907 ntBASIC15.99■□□□□ 0.15
MTHFRP42898 U62317.3-201ENST00000608319 855 ntBASIC15.99■□□□□ 0.15
MTHFRP42898 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.99■□□□□ 0.15
MTHFRP42898 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MTHFRP42898 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
MTHFRP42898 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
MTHFRP42898 KRT8P14-201ENST00000414254 1442 ntBASIC15.99■□□□□ 0.15
MTHFRP42898 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MTHFRP42898 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
MTHFRP42898 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
MTHFRP42898 AL365203.3-201ENST00000609742 2057 ntBASIC15.99■□□□□ 0.15
MTHFRP42898 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MTHFRP42898 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
MTHFRP42898 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
MTHFRP42898 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.99■□□□□ 0.15
MTHFRP42898 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.99■□□□□ 0.15
MTHFRP42898 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.99■□□□□ 0.15
MTHFRP42898 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
MTHFRP42898 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MTHFRP42898 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.98■□□□□ 0.15
MTHFRP42898 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
MTHFRP42898 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
MTHFRP42898 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.98■□□□□ 0.15
MTHFRP42898 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.98■□□□□ 0.15
MTHFRP42898 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
MTHFRP42898 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MTHFRP42898 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.98■□□□□ 0.15
MTHFRP42898 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.98■□□□□ 0.15
MTHFRP42898 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
MTHFRP42898 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MTHFRP42898 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
MTHFRP42898 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MTHFRP42898 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MTHFRP42898 MIR33B-201ENST00000385104 96 ntBASIC15.98■□□□□ 0.15
MTHFRP42898 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
MTHFRP42898 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MTHFRP42898 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.98■□□□□ 0.15
MTHFRP42898 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.98■□□□□ 0.15
MTHFRP42898 AL354877.1-201ENST00000424412 413 ntBASIC15.98■□□□□ 0.15
MTHFRP42898 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.98■□□□□ 0.15
MTHFRP42898 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.98■□□□□ 0.15
MTHFRP42898 AC011742.3-201ENST00000439053 820 ntBASIC15.98■□□□□ 0.15
MTHFRP42898 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.98■□□□□ 0.15
MTHFRP42898 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.98■□□□□ 0.15
MTHFRP42898 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.98■□□□□ 0.15
MTHFRP42898 FGFR3P5-201ENST00000564496 886 ntBASIC15.98■□□□□ 0.15
MTHFRP42898 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.98■□□□□ 0.15
MTHFRP42898 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.98■□□□□ 0.15
MTHFRP42898 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MTHFRP42898 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.98■□□□□ 0.15
MTHFRP42898 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MTHFRP42898 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MTHFRP42898 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.98■□□□□ 0.15
MTHFRP42898 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MTHFRP42898 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MTHFRP42898 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MTHFRP42898 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
MTHFRP42898 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.98■□□□□ 0.15
MTHFRP42898 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
MTHFRP42898 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MTHFRP42898 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
MTHFRP42898 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
MTHFRP42898 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.97■□□□□ 0.15
MTHFRP42898 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.97■□□□□ 0.15
MTHFRP42898 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.97■□□□□ 0.15
MTHFRP42898 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
MTHFRP42898 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.97■□□□□ 0.15
MTHFRP42898 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
MTHFRP42898 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.97■□□□□ 0.15
MTHFRP42898 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
MTHFRP42898 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MTHFRP42898 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MTHFRP42898 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
MTHFRP42898 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.97■□□□□ 0.15
MTHFRP42898 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
MTHFRP42898 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MTHFRP42898 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.97■□□□□ 0.15
MTHFRP42898 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.97■□□□□ 0.15
MTHFRP42898 AC021723.1-201ENST00000486306 515 ntBASIC15.97■□□□□ 0.15
MTHFRP42898 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.97■□□□□ 0.15
MTHFRP42898 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.97■□□□□ 0.15
MTHFRP42898 AC022217.1-201ENST00000521069 738 ntBASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms