Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.41■□□□□ 0.22
HOXC8P31273 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC8P31273 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.41■□□□□ 0.22
HOXC8P31273 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HOXC8P31273 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC8P31273 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC8P31273 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC8P31273 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC8P31273 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC8P31273 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.41■□□□□ 0.22
HOXC8P31273 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC8P31273 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.41■□□□□ 0.22
HOXC8P31273 AL645933.1-201ENST00000440087 609 ntBASIC16.41■□□□□ 0.22
HOXC8P31273 AL353637.1-201ENST00000451571 732 ntBASIC16.41■□□□□ 0.22
HOXC8P31273 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.41■□□□□ 0.22
HOXC8P31273 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.41■□□□□ 0.22
HOXC8P31273 AC242376.1-201ENST00000559033 726 ntBASIC16.41■□□□□ 0.22
HOXC8P31273 MIR4754-201ENST00000582477 89 ntBASIC16.41■□□□□ 0.22
HOXC8P31273 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.41■□□□□ 0.22
HOXC8P31273 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.41■□□□□ 0.22
HOXC8P31273 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.41■□□□□ 0.22
HOXC8P31273 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.41■□□□□ 0.22
HOXC8P31273 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC8P31273 TMBIM7P-203ENST00000641617 1718 ntBASIC16.41■□□□□ 0.22
HOXC8P31273 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.41■□□□□ 0.22
HOXC8P31273 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC8P31273 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC8P31273 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.41■□□□□ 0.22
HOXC8P31273 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC8P31273 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HOXC8P31273 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC8P31273 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC8P31273 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.41■□□□□ 0.22
HOXC8P31273 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HOXC8P31273 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC8P31273 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC8P31273 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.4■□□□□ 0.22
HOXC8P31273 WASH3P-207ENST00000560956 1394 ntBASIC16.4■□□□□ 0.22
HOXC8P31273 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC8P31273 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HOXC8P31273 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC8P31273 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
HOXC8P31273 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC8P31273 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC8P31273 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.4■□□□□ 0.22
HOXC8P31273 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC8P31273 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.4■□□□□ 0.22
HOXC8P31273 AC234782.1-201ENST00000451950 919 ntBASIC16.4■□□□□ 0.22
HOXC8P31273 CEP164P1-201ENST00000455142 418 ntBASIC16.4■□□□□ 0.22
HOXC8P31273 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.4■□□□□ 0.22
HOXC8P31273 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.4■□□□□ 0.22
HOXC8P31273 AC116345.2-201ENST00000512837 523 ntBASIC16.4■□□□□ 0.22
HOXC8P31273 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.4■□□□□ 0.22
HOXC8P31273 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.4■□□□□ 0.22
HOXC8P31273 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
HOXC8P31273 AC005962.1-201ENST00000584100 773 ntBASIC16.4■□□□□ 0.22
HOXC8P31273 AC008805.1-201ENST00000590892 364 ntBASIC16.4■□□□□ 0.22
HOXC8P31273 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC8P31273 AC009884.2-201ENST00000603110 324 ntBASIC16.4■□□□□ 0.22
HOXC8P31273 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.4■□□□□ 0.22
HOXC8P31273 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC8P31273 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC8P31273 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC8P31273 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
HOXC8P31273 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC8P31273 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.4■□□□□ 0.22
HOXC8P31273 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC8P31273 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC8P31273 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC8P31273 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HOXC8P31273 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC8P31273 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HOXC8P31273 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HOXC8P31273 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HOXC8P31273 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
HOXC8P31273 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
HOXC8P31273 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HOXC8P31273 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HOXC8P31273 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HOXC8P31273 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
HOXC8P31273 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HOXC8P31273 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.39■□□□□ 0.21
HOXC8P31273 ZBED1P1-201ENST00000502364 1930 ntBASIC16.39■□□□□ 0.21
HOXC8P31273 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.39■□□□□ 0.21
HOXC8P31273 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HOXC8P31273 SALL4P5-201ENST00000419001 1760 ntBASIC16.39■□□□□ 0.21
HOXC8P31273 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HOXC8P31273 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HOXC8P31273 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HOXC8P31273 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.39■□□□□ 0.21
HOXC8P31273 EEF1DP6-201ENST00000449232 372 ntBASIC16.39■□□□□ 0.21
HOXC8P31273 RPS2P36-201ENST00000456516 831 ntBASIC16.39■□□□□ 0.21
HOXC8P31273 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.39■□□□□ 0.21
HOXC8P31273 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
HOXC8P31273 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
HOXC8P31273 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HOXC8P31273 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.39■□□□□ 0.21
HOXC8P31273 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
HOXC8P31273 AC027601.3-201ENST00000622907 509 ntBASIC16.39■□□□□ 0.21
HOXC8P31273 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms