Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14□□□□□ -0.17
CD53P19397 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14□□□□□ -0.17
CD53P19397 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14□□□□□ -0.17
CD53P19397 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14□□□□□ -0.17
CD53P19397 WASH3P-207ENST00000560956 1394 ntBASIC14□□□□□ -0.17
CD53P19397 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CD53P19397 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CD53P19397 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14□□□□□ -0.17
CD53P19397 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14□□□□□ -0.17
CD53P19397 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CD53P19397 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD53P19397 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD53P19397 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD53P19397 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14□□□□□ -0.17
CD53P19397 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CD53P19397 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD53P19397 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14□□□□□ -0.17
CD53P19397 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14□□□□□ -0.17
CD53P19397 AC011495.1-201ENST00000498085 584 ntBASIC14□□□□□ -0.17
CD53P19397 AC098859.1-201ENST00000502915 1238 ntBASIC14□□□□□ -0.17
CD53P19397 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14□□□□□ -0.17
CD53P19397 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14□□□□□ -0.17
CD53P19397 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14□□□□□ -0.17
CD53P19397 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CD53P19397 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14□□□□□ -0.17
CD53P19397 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14□□□□□ -0.17
CD53P19397 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
CD53P19397 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CD53P19397 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD53P19397 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CD53P19397 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD53P19397 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD53P19397 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CD53P19397 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CD53P19397 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CD53P19397 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
CD53P19397 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CD53P19397 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14□□□□□ -0.17
CD53P19397 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD53P19397 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD53P19397 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CD53P19397 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
CD53P19397 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14□□□□□ -0.17
CD53P19397 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD53P19397 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD53P19397 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14□□□□□ -0.17
CD53P19397 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD53P19397 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CD53P19397 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CD53P19397 AL691432.1-201ENST00000596308 1422 ntBASIC13.99□□□□□ -0.17
CD53P19397 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CD53P19397 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.99□□□□□ -0.17
CD53P19397 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CD53P19397 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD53P19397 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD53P19397 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD53P19397 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CD53P19397 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD53P19397 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CD53P19397 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.99□□□□□ -0.17
CD53P19397 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD53P19397 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD53P19397 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CD53P19397 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CD53P19397 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD53P19397 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD53P19397 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.99□□□□□ -0.17
CD53P19397 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.99□□□□□ -0.17
CD53P19397 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.99□□□□□ -0.17
CD53P19397 ACA64.2-201ENST00000459014 129 ntBASIC13.99□□□□□ -0.17
CD53P19397 RNA5SP410-201ENST00000516285 106 ntBASIC13.99□□□□□ -0.17
CD53P19397 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
CD53P19397 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.99□□□□□ -0.17
CD53P19397 AC132938.2-201ENST00000579188 680 ntBASIC13.99□□□□□ -0.17
CD53P19397 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.99□□□□□ -0.17
CD53P19397 AL591163.1-201ENST00000641757 987 ntBASIC13.99□□□□□ -0.17
CD53P19397 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD53P19397 REXO1L1P-202ENST00000608646 1974 ntBASIC13.99□□□□□ -0.17
CD53P19397 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD53P19397 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD53P19397 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
CD53P19397 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CD53P19397 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
CD53P19397 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD53P19397 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD53P19397 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD53P19397 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
CD53P19397 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CD53P19397 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD53P19397 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CD53P19397 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD53P19397 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD53P19397 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.98□□□□□ -0.17
CD53P19397 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CD53P19397 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD53P19397 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.98□□□□□ -0.17
CD53P19397 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD53P19397 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD53P19397 OR2I1P-210ENST00000642037 4691 ntBASIC13.98□□□□□ -0.17
CD53P19397 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms