Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NELFEP18615 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.24■□□□□ 0.03
NELFEP18615 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NELFEP18615 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.24■□□□□ 0.03
NELFEP18615 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.24■□□□□ 0.03
NELFEP18615 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NELFEP18615 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NELFEP18615 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
NELFEP18615 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.24■□□□□ 0.03
NELFEP18615 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NELFEP18615 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NELFEP18615 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NELFEP18615 ST20-AS1-201ENST00000560255 4223 ntBASIC15.24■□□□□ 0.03
NELFEP18615 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NELFEP18615 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
NELFEP18615 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NELFEP18615 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NELFEP18615 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NELFEP18615 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
NELFEP18615 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.23■□□□□ 0.03
NELFEP18615 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.23■□□□□ 0.03
NELFEP18615 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NELFEP18615 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.23■□□□□ 0.03
NELFEP18615 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
NELFEP18615 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NELFEP18615 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NELFEP18615 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
NELFEP18615 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NELFEP18615 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.23■□□□□ 0.03
NELFEP18615 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
NELFEP18615 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NELFEP18615 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
NELFEP18615 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.23■□□□□ 0.03
NELFEP18615 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 RN7SL752P-201ENST00000463779 287 ntBASIC15.23■□□□□ 0.03
NELFEP18615 AC011495.1-201ENST00000498085 584 ntBASIC15.23■□□□□ 0.03
NELFEP18615 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.23■□□□□ 0.03
NELFEP18615 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 AC123567.1-201ENST00000548294 1261 ntBASIC15.23■□□□□ 0.03
NELFEP18615 RARRES2P5-201ENST00000564013 466 ntBASIC15.23■□□□□ 0.03
NELFEP18615 WASH4P-201ENST00000564273 1246 ntBASIC15.23■□□□□ 0.03
NELFEP18615 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.23■□□□□ 0.03
NELFEP18615 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.23■□□□□ 0.03
NELFEP18615 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.23■□□□□ 0.03
NELFEP18615 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
NELFEP18615 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.23■□□□□ 0.03
NELFEP18615 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NELFEP18615 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.23■□□□□ 0.03
NELFEP18615 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NELFEP18615 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NELFEP18615 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.23■□□□□ 0.03
NELFEP18615 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NELFEP18615 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFEP18615 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFEP18615 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFEP18615 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFEP18615 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NELFEP18615 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
NELFEP18615 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFEP18615 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFEP18615 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFEP18615 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFEP18615 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NELFEP18615 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFEP18615 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
NELFEP18615 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.22■□□□□ 0.03
NELFEP18615 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFEP18615 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFEP18615 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFEP18615 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.22■□□□□ 0.03
NELFEP18615 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms