Protein–RNA interactions for Protein: P16144

ITGB4, Integrin beta-4, humanhuman

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4P16144 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ITGB4P16144 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC19.05■□□□□ 0.64
ITGB4P16144 AC090502.4-201ENST00000551714 1386 ntBASIC19.05■□□□□ 0.64
ITGB4P16144 AC026471.1-201ENST00000564629 3026 ntBASIC19.05■□□□□ 0.64
ITGB4P16144 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ITGB4P16144 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ITGB4P16144 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ITGB4P16144 RPL7P35-201ENST00000446943 740 ntBASIC19.04■□□□□ 0.64
ITGB4P16144 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ITGB4P16144 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC19.04■□□□□ 0.64
ITGB4P16144 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ITGB4P16144 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC19.04■□□□□ 0.64
ITGB4P16144 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
ITGB4P16144 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
ITGB4P16144 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.04■□□□□ 0.64
ITGB4P16144 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.04■□□□□ 0.64
ITGB4P16144 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ITGB4P16144 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC19.04■□□□□ 0.64
ITGB4P16144 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ITGB4P16144 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ITGB4P16144 AL365203.3-201ENST00000609742 2057 ntBASIC19.04■□□□□ 0.64
ITGB4P16144 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ITGB4P16144 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ITGB4P16144 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC19.04■□□□□ 0.64
ITGB4P16144 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC19.04■□□□□ 0.64
ITGB4P16144 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC19.04■□□□□ 0.64
ITGB4P16144 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC19.04■□□□□ 0.64
ITGB4P16144 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
ITGB4P16144 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ITGB4P16144 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ITGB4P16144 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC19.03■□□□□ 0.64
ITGB4P16144 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC19.03■□□□□ 0.64
ITGB4P16144 CYP51A1P3-201ENST00000400072 1428 ntBASIC19.03■□□□□ 0.64
ITGB4P16144 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC19.03■□□□□ 0.64
ITGB4P16144 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ITGB4P16144 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ITGB4P16144 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ITGB4P16144 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ITGB4P16144 IL9RP3-201ENST00000442856 1674 ntBASIC19.03■□□□□ 0.64
ITGB4P16144 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ITGB4P16144 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
ITGB4P16144 AHCYP4-201ENST00000419201 1315 ntBASIC19.03■□□□□ 0.64
ITGB4P16144 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ITGB4P16144 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ITGB4P16144 AC012362.1-201ENST00000434906 739 ntBASIC19.03■□□□□ 0.64
ITGB4P16144 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC19.03■□□□□ 0.64
ITGB4P16144 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC19.03■□□□□ 0.64
ITGB4P16144 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ITGB4P16144 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ITGB4P16144 KHSRPP1-201ENST00000427983 1768 ntBASIC19.03■□□□□ 0.64
ITGB4P16144 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ITGB4P16144 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.03■□□□□ 0.64
ITGB4P16144 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC19.03■□□□□ 0.64
ITGB4P16144 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC19.03■□□□□ 0.64
ITGB4P16144 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ITGB4P16144 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ITGB4P16144 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ITGB4P16144 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
ITGB4P16144 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.02■□□□□ 0.64
ITGB4P16144 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ITGB4P16144 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ITGB4P16144 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC19.02■□□□□ 0.64
ITGB4P16144 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ITGB4P16144 BANF1P3-201ENST00000412556 261 ntBASIC19.02■□□□□ 0.64
ITGB4P16144 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ITGB4P16144 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC19.02■□□□□ 0.64
ITGB4P16144 MIR6858-201ENST00000620733 67 ntBASIC19.02■□□□□ 0.64
ITGB4P16144 AL161773.1-201ENST00000624845 863 ntBASIC19.02■□□□□ 0.64
ITGB4P16144 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ITGB4P16144 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC19.02■□□□□ 0.64
ITGB4P16144 C18orf15-201ENST00000623680 2534 ntBASIC19.02■□□□□ 0.64
ITGB4P16144 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.02■□□□□ 0.64
ITGB4P16144 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ITGB4P16144 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC19.02■□□□□ 0.64
ITGB4P16144 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ITGB4P16144 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC19.02■□□□□ 0.64
ITGB4P16144 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.02■□□□□ 0.64
ITGB4P16144 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ITGB4P16144 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
ITGB4P16144 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ITGB4P16144 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ITGB4P16144 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC19.02■□□□□ 0.63
ITGB4P16144 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ITGB4P16144 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC19.02■□□□□ 0.63
ITGB4P16144 MIR6769A-201ENST00000617340 73 ntBASIC19.02■□□□□ 0.63
ITGB4P16144 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC19.02■□□□□ 0.63
ITGB4P16144 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ITGB4P16144 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
ITGB4P16144 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC19.02■□□□□ 0.63
ITGB4P16144 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.02■□□□□ 0.63
ITGB4P16144 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.63
ITGB4P16144 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ITGB4P16144 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC19.01■□□□□ 0.63
ITGB4P16144 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ITGB4P16144 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ITGB4P16144 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.01■□□□□ 0.63
ITGB4P16144 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
ITGB4P16144 AC126365.1-201ENST00000578585 1514 ntBASIC19.01■□□□□ 0.63
ITGB4P16144 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ITGB4P16144 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms