Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.84■□□□□ 0.13
BRAFP15056 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.84■□□□□ 0.13
BRAFP15056 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.84■□□□□ 0.13
BRAFP15056 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BRAFP15056 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BRAFP15056 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BRAFP15056 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
BRAFP15056 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.83■□□□□ 0.13
BRAFP15056 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
BRAFP15056 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.83■□□□□ 0.13
BRAFP15056 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
BRAFP15056 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
BRAFP15056 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
BRAFP15056 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.83■□□□□ 0.13
BRAFP15056 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
BRAFP15056 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
BRAFP15056 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
BRAFP15056 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.83■□□□□ 0.13
BRAFP15056 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BRAFP15056 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.83■□□□□ 0.12
BRAFP15056 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
BRAFP15056 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRAFP15056 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BRAFP15056 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.83■□□□□ 0.12
BRAFP15056 MTND6P24-201ENST00000440466 518 ntBASIC15.83■□□□□ 0.12
BRAFP15056 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.83■□□□□ 0.12
BRAFP15056 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BRAFP15056 HLA-V-204ENST00000476601 1289 ntBASIC15.83■□□□□ 0.12
BRAFP15056 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.83■□□□□ 0.12
BRAFP15056 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.83■□□□□ 0.12
BRAFP15056 AC027369.6-201ENST00000525520 931 ntBASIC15.83■□□□□ 0.12
BRAFP15056 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.83■□□□□ 0.12
BRAFP15056 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.83■□□□□ 0.12
BRAFP15056 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.83■□□□□ 0.12
BRAFP15056 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.83■□□□□ 0.12
BRAFP15056 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.83■□□□□ 0.12
BRAFP15056 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
BRAFP15056 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.83■□□□□ 0.12
BRAFP15056 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.83■□□□□ 0.12
BRAFP15056 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BRAFP15056 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRAFP15056 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRAFP15056 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRAFP15056 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.83■□□□□ 0.12
BRAFP15056 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRAFP15056 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BRAFP15056 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRAFP15056 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.83■□□□□ 0.12
BRAFP15056 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRAFP15056 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
BRAFP15056 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRAFP15056 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRAFP15056 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRAFP15056 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRAFP15056 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRAFP15056 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.82■□□□□ 0.12
BRAFP15056 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
BRAFP15056 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRAFP15056 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRAFP15056 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRAFP15056 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BRAFP15056 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRAFP15056 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.82■□□□□ 0.12
BRAFP15056 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRAFP15056 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRAFP15056 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRAFP15056 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRAFP15056 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
BRAFP15056 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BRAFP15056 AC015656.1-201ENST00000624209 3578 ntBASIC15.82■□□□□ 0.12
BRAFP15056 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRAFP15056 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRAFP15056 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRAFP15056 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
BRAFP15056 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.82■□□□□ 0.12
BRAFP15056 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.82■□□□□ 0.12
BRAFP15056 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BRAFP15056 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
BRAFP15056 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.82■□□□□ 0.12
BRAFP15056 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.82■□□□□ 0.12
BRAFP15056 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BRAFP15056 BASP1P1-201ENST00000430708 665 ntBASIC15.82■□□□□ 0.12
BRAFP15056 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.82■□□□□ 0.12
BRAFP15056 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.82■□□□□ 0.12
BRAFP15056 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.82■□□□□ 0.12
BRAFP15056 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.82■□□□□ 0.12
BRAFP15056 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRAFP15056 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRAFP15056 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRAFP15056 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
BRAFP15056 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.82■□□□□ 0.12
BRAFP15056 AC100757.3-201ENST00000622361 1406 ntBASIC15.82■□□□□ 0.12
BRAFP15056 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.82■□□□□ 0.12
BRAFP15056 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRAFP15056 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
BRAFP15056 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.82■□□□□ 0.12
BRAFP15056 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRAFP15056 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRAFP15056 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
BRAFP15056 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms