Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
CCL4P13236 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCL4P13236 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.33□□□□□ -0.12
CCL4P13236 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.33□□□□□ -0.12
CCL4P13236 AL133466.1-201ENST00000447582 150 ntBASIC14.33□□□□□ -0.12
CCL4P13236 AC104073.2-201ENST00000453737 312 ntBASIC14.33□□□□□ -0.12
CCL4P13236 AC022217.1-201ENST00000521069 738 ntBASIC14.33□□□□□ -0.12
CCL4P13236 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.33□□□□□ -0.12
CCL4P13236 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CCL4P13236 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.33□□□□□ -0.12
CCL4P13236 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL4P13236 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.33□□□□□ -0.12
CCL4P13236 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.33□□□□□ -0.12
CCL4P13236 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.33□□□□□ -0.12
CCL4P13236 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.33□□□□□ -0.12
CCL4P13236 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.33□□□□□ -0.12
CCL4P13236 AL358472.3-201ENST00000608147 415 ntBASIC14.33□□□□□ -0.12
CCL4P13236 AL136301.1-201ENST00000615830 422 ntBASIC14.33□□□□□ -0.12
CCL4P13236 AC091544.8-201ENST00000619490 361 ntBASIC14.33□□□□□ -0.12
CCL4P13236 AL023803.2-201ENST00000620080 638 ntBASIC14.33□□□□□ -0.12
CCL4P13236 AC091812.3-201ENST00000621362 345 ntBASIC14.33□□□□□ -0.12
CCL4P13236 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL4P13236 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL4P13236 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL4P13236 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.33□□□□□ -0.12
CCL4P13236 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL4P13236 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CCL4P13236 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL4P13236 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.33□□□□□ -0.12
CCL4P13236 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCL4P13236 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCL4P13236 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.33□□□□□ -0.12
CCL4P13236 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CCL4P13236 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.33□□□□□ -0.12
CCL4P13236 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.33□□□□□ -0.12
CCL4P13236 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL4P13236 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL4P13236 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.32□□□□□ -0.12
CCL4P13236 AP000593.2-201ENST00000542775 1433 ntBASIC14.32□□□□□ -0.12
CCL4P13236 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL4P13236 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL4P13236 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.32□□□□□ -0.12
CCL4P13236 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL4P13236 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL4P13236 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL4P13236 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL4P13236 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCL4P13236 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL4P13236 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL4P13236 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
CCL4P13236 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL4P13236 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL4P13236 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL4P13236 AC091046.1-201ENST00000331871 207 ntBASIC14.32□□□□□ -0.12
CCL4P13236 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CCL4P13236 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.32□□□□□ -0.12
CCL4P13236 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.32□□□□□ -0.12
CCL4P13236 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCL4P13236 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.32□□□□□ -0.12
CCL4P13236 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL4P13236 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.32□□□□□ -0.12
CCL4P13236 Z97180.1-201ENST00000445173 988 ntBASIC14.32□□□□□ -0.12
CCL4P13236 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.32□□□□□ -0.12
CCL4P13236 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC14.32□□□□□ -0.12
CCL4P13236 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.32□□□□□ -0.12
CCL4P13236 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.32□□□□□ -0.12
CCL4P13236 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCL4P13236 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.32□□□□□ -0.12
CCL4P13236 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.32□□□□□ -0.12
CCL4P13236 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.32□□□□□ -0.12
CCL4P13236 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL4P13236 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.32□□□□□ -0.12
CCL4P13236 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.32□□□□□ -0.12
CCL4P13236 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCL4P13236 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL4P13236 AL645939.5-201ENST00000606834 243 ntBASIC14.32□□□□□ -0.12
CCL4P13236 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.32□□□□□ -0.12
CCL4P13236 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.32□□□□□ -0.12
CCL4P13236 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.32□□□□□ -0.12
CCL4P13236 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL4P13236 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL4P13236 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.32□□□□□ -0.12
CCL4P13236 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CCL4P13236 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL4P13236 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL4P13236 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL4P13236 AC009093.2-202ENST00000620513 2079 ntBASIC14.32□□□□□ -0.12
CCL4P13236 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
CCL4P13236 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CCL4P13236 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
CCL4P13236 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL4P13236 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL4P13236 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
CCL4P13236 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.32□□□□□ -0.12
CCL4P13236 KRT8P19-201ENST00000551916 1455 ntBASIC14.31□□□□□ -0.12
CCL4P13236 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL4P13236 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL4P13236 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL4P13236 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL4P13236 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms