Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.26□□□□□ -0.13
UBL4AP11441 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
UBL4AP11441 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBL4AP11441 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBL4AP11441 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
UBL4AP11441 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBL4AP11441 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBL4AP11441 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.26□□□□□ -0.13
UBL4AP11441 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBL4AP11441 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
UBL4AP11441 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBL4AP11441 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBL4AP11441 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
UBL4AP11441 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.26□□□□□ -0.13
UBL4AP11441 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.26□□□□□ -0.13
UBL4AP11441 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.26□□□□□ -0.13
UBL4AP11441 MEIS3P1-201ENST00000495167 958 ntBASIC14.26□□□□□ -0.13
UBL4AP11441 SPDYE18-201ENST00000510091 1050 ntBASIC14.26□□□□□ -0.13
UBL4AP11441 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBL4AP11441 AC104794.3-201ENST00000566840 1248 ntBASIC14.26□□□□□ -0.13
UBL4AP11441 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.26□□□□□ -0.13
UBL4AP11441 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.26□□□□□ -0.13
UBL4AP11441 SRD5A3P1-201ENST00000603021 949 ntBASIC14.26□□□□□ -0.13
UBL4AP11441 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBL4AP11441 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBL4AP11441 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
UBL4AP11441 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBL4AP11441 AL356585.2-201ENST00000625078 2396 ntBASIC14.26□□□□□ -0.13
UBL4AP11441 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBL4AP11441 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBL4AP11441 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
UBL4AP11441 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
UBL4AP11441 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.26□□□□□ -0.13
UBL4AP11441 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBL4AP11441 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.26□□□□□ -0.13
UBL4AP11441 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBL4AP11441 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBL4AP11441 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
UBL4AP11441 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBL4AP11441 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBL4AP11441 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
UBL4AP11441 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBL4AP11441 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBL4AP11441 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBL4AP11441 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBL4AP11441 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBL4AP11441 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.25□□□□□ -0.13
UBL4AP11441 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.25□□□□□ -0.13
UBL4AP11441 AC023024.2-201ENST00000623561 1993 ntBASIC14.25□□□□□ -0.13
UBL4AP11441 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBL4AP11441 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBL4AP11441 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBL4AP11441 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
UBL4AP11441 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBL4AP11441 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBL4AP11441 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
UBL4AP11441 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
UBL4AP11441 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBL4AP11441 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBL4AP11441 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBL4AP11441 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBL4AP11441 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.25□□□□□ -0.13
UBL4AP11441 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBL4AP11441 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.25□□□□□ -0.13
UBL4AP11441 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.25□□□□□ -0.13
UBL4AP11441 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBL4AP11441 INGX-202ENST00000489074 768 ntBASIC14.25□□□□□ -0.13
UBL4AP11441 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.25□□□□□ -0.13
UBL4AP11441 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.25□□□□□ -0.13
UBL4AP11441 AC027796.2-201ENST00000575326 344 ntBASIC14.25□□□□□ -0.13
UBL4AP11441 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
UBL4AP11441 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.25□□□□□ -0.13
UBL4AP11441 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBL4AP11441 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBL4AP11441 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
UBL4AP11441 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBL4AP11441 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBL4AP11441 AL161772.1-201ENST00000610494 4412 ntBASIC14.25□□□□□ -0.13
UBL4AP11441 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBL4AP11441 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBL4AP11441 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBL4AP11441 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBL4AP11441 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBL4AP11441 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBL4AP11441 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBL4AP11441 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBL4AP11441 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
UBL4AP11441 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBL4AP11441 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
UBL4AP11441 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.24□□□□□ -0.13
UBL4AP11441 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBL4AP11441 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBL4AP11441 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBL4AP11441 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
UBL4AP11441 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
UBL4AP11441 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UBL4AP11441 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.24□□□□□ -0.13
UBL4AP11441 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UBL4AP11441 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.24□□□□□ -0.13
UBL4AP11441 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms