Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CLUP10909 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
CLUP10909 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.88□□□□□ -0.19
CLUP10909 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLUP10909 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CLUP10909 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLUP10909 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLUP10909 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLUP10909 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLUP10909 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLUP10909 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLUP10909 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.88□□□□□ -0.19
CLUP10909 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.88□□□□□ -0.19
CLUP10909 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.88□□□□□ -0.19
CLUP10909 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.88□□□□□ -0.19
CLUP10909 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CLUP10909 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.88□□□□□ -0.19
CLUP10909 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.88□□□□□ -0.19
CLUP10909 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLUP10909 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.88□□□□□ -0.19
CLUP10909 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
CLUP10909 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.88□□□□□ -0.19
CLUP10909 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLUP10909 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLUP10909 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.88□□□□□ -0.19
CLUP10909 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLUP10909 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.88□□□□□ -0.19
CLUP10909 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLUP10909 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLUP10909 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLUP10909 MTHFR-210ENST00000641407 2387 ntBASIC13.88□□□□□ -0.19
CLUP10909 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLUP10909 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CLUP10909 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLUP10909 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLUP10909 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLUP10909 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.88□□□□□ -0.19
CLUP10909 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.88□□□□□ -0.19
CLUP10909 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLUP10909 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.88□□□□□ -0.19
CLUP10909 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLUP10909 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLUP10909 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLUP10909 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CLUP10909 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.87□□□□□ -0.19
CLUP10909 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLUP10909 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CLUP10909 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CLUP10909 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLUP10909 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLUP10909 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLUP10909 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CLUP10909 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLUP10909 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CLUP10909 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CLUP10909 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLUP10909 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.87□□□□□ -0.19
CLUP10909 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CLUP10909 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.87□□□□□ -0.19
CLUP10909 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLUP10909 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLUP10909 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLUP10909 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.87□□□□□ -0.19
CLUP10909 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLUP10909 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLUP10909 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CLUP10909 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.87□□□□□ -0.19
CLUP10909 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.87□□□□□ -0.19
CLUP10909 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.87□□□□□ -0.19
CLUP10909 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.87□□□□□ -0.19
CLUP10909 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.87□□□□□ -0.19
CLUP10909 YBX1P5-201ENST00000509441 847 ntBASIC13.87□□□□□ -0.19
CLUP10909 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.87□□□□□ -0.19
CLUP10909 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.87□□□□□ -0.19
CLUP10909 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLUP10909 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLUP10909 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.87□□□□□ -0.19
CLUP10909 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.87□□□□□ -0.19
CLUP10909 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.87□□□□□ -0.19
CLUP10909 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.87□□□□□ -0.19
CLUP10909 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CLUP10909 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLUP10909 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CLUP10909 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.87□□□□□ -0.19
CLUP10909 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.87□□□□□ -0.19
CLUP10909 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLUP10909 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLUP10909 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLUP10909 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.87□□□□□ -0.19
CLUP10909 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLUP10909 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.87□□□□□ -0.19
CLUP10909 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLUP10909 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CLUP10909 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CLUP10909 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CLUP10909 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms