Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTSBP07858 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CTSBP07858 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CTSBP07858 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTSBP07858 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CTSBP07858 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTSBP07858 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTSBP07858 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTSBP07858 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTSBP07858 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CTSBP07858 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.43□□□□□ -0.1
CTSBP07858 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CTSBP07858 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CTSBP07858 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTSBP07858 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTSBP07858 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTSBP07858 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CTSBP07858 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTSBP07858 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.43□□□□□ -0.1
CTSBP07858 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTSBP07858 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CTSBP07858 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.43□□□□□ -0.1
CTSBP07858 AC092658.1-201ENST00000505836 891 ntBASIC14.43□□□□□ -0.1
CTSBP07858 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.43□□□□□ -0.1
CTSBP07858 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CTSBP07858 RNA5SP412-201ENST00000516234 123 ntBASIC14.43□□□□□ -0.1
CTSBP07858 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CTSBP07858 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.43□□□□□ -0.1
CTSBP07858 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.43□□□□□ -0.1
CTSBP07858 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.43□□□□□ -0.1
CTSBP07858 MIR6799-201ENST00000620297 69 ntBASIC14.43□□□□□ -0.1
CTSBP07858 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.43□□□□□ -0.1
CTSBP07858 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.43□□□□□ -0.1
CTSBP07858 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTSBP07858 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTSBP07858 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CTSBP07858 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTSBP07858 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTSBP07858 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CTSBP07858 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CTSBP07858 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CTSBP07858 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CTSBP07858 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.43□□□□□ -0.1
CTSBP07858 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTSBP07858 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CTSBP07858 CLUHP2-201ENST00000426660 1303 ntBASIC14.42□□□□□ -0.1
CTSBP07858 AHCYP2-201ENST00000430630 1300 ntBASIC14.42□□□□□ -0.1
CTSBP07858 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTSBP07858 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
CTSBP07858 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.42□□□□□ -0.1
CTSBP07858 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTSBP07858 AC046158.3-201ENST00000624947 2558 ntBASIC14.42□□□□□ -0.1
CTSBP07858 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTSBP07858 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTSBP07858 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.42□□□□□ -0.1
CTSBP07858 INE2-201ENST00000630399 1874 ntBASIC14.42□□□□□ -0.1
CTSBP07858 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CTSBP07858 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CTSBP07858 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CTSBP07858 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTSBP07858 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.42□□□□□ -0.1
CTSBP07858 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CTSBP07858 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.42□□□□□ -0.1
CTSBP07858 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.42□□□□□ -0.1
CTSBP07858 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CTSBP07858 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CTSBP07858 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CTSBP07858 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTSBP07858 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CTSBP07858 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CTSBP07858 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.42□□□□□ -0.1
CTSBP07858 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.42□□□□□ -0.1
CTSBP07858 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CTSBP07858 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CTSBP07858 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTSBP07858 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CTSBP07858 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTSBP07858 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTSBP07858 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTSBP07858 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CTSBP07858 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTSBP07858 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTSBP07858 MROH4P-201ENST00000431302 1578 ntBASIC14.42□□□□□ -0.1
CTSBP07858 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.42□□□□□ -0.1
CTSBP07858 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTSBP07858 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
CTSBP07858 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CTSBP07858 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.42□□□□□ -0.1
CTSBP07858 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTSBP07858 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTSBP07858 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTSBP07858 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.42□□□□□ -0.1
CTSBP07858 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CTSBP07858 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CTSBP07858 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTSBP07858 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CTSBP07858 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.41□□□□□ -0.1
CTSBP07858 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTSBP07858 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTSBP07858 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms