Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR3DP05423 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
POLR3DP05423 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
POLR3DP05423 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR3DP05423 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR3DP05423 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
POLR3DP05423 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
POLR3DP05423 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR3DP05423 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC18.3■□□□□ 0.52
POLR3DP05423 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR3DP05423 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR3DP05423 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.3■□□□□ 0.52
POLR3DP05423 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR3DP05423 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR3DP05423 TMBIM7P-203ENST00000641617 1718 ntBASIC18.29■□□□□ 0.52
POLR3DP05423 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.29■□□□□ 0.52
POLR3DP05423 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
POLR3DP05423 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.29■□□□□ 0.52
POLR3DP05423 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
POLR3DP05423 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR3DP05423 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.29■□□□□ 0.52
POLR3DP05423 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
POLR3DP05423 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
POLR3DP05423 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
POLR3DP05423 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.29■□□□□ 0.52
POLR3DP05423 KLF2P2-201ENST00000416807 1039 ntBASIC18.29■□□□□ 0.52
POLR3DP05423 AC099336.1-201ENST00000417053 1171 ntBASIC18.29■□□□□ 0.52
POLR3DP05423 NUS1P3-201ENST00000423502 862 ntBASIC18.29■□□□□ 0.52
POLR3DP05423 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
POLR3DP05423 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR3DP05423 CSF2RBP1-201ENST00000447905 391 ntBASIC18.29■□□□□ 0.52
POLR3DP05423 AC114812.1-204ENST00000449669 728 ntBASIC18.29■□□□□ 0.52
POLR3DP05423 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
POLR3DP05423 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
POLR3DP05423 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.29■□□□□ 0.52
POLR3DP05423 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.29■□□□□ 0.52
POLR3DP05423 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.29■□□□□ 0.52
POLR3DP05423 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR3DP05423 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR3DP05423 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
POLR3DP05423 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.29■□□□□ 0.52
POLR3DP05423 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
POLR3DP05423 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.29■□□□□ 0.52
POLR3DP05423 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
POLR3DP05423 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR3DP05423 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR3DP05423 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR3DP05423 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
POLR3DP05423 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR3DP05423 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC18.28■□□□□ 0.52
POLR3DP05423 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
POLR3DP05423 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR3DP05423 AC138035.3-201ENST00000622706 2791 ntBASIC18.28■□□□□ 0.52
POLR3DP05423 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.28■□□□□ 0.52
POLR3DP05423 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.28■□□□□ 0.52
POLR3DP05423 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
POLR3DP05423 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR3DP05423 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
POLR3DP05423 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR3DP05423 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR3DP05423 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
POLR3DP05423 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
POLR3DP05423 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR3DP05423 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
POLR3DP05423 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.28■□□□□ 0.52
POLR3DP05423 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
POLR3DP05423 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.28■□□□□ 0.52
POLR3DP05423 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.28■□□□□ 0.52
POLR3DP05423 KRT90P-201ENST00000549264 1064 ntBASIC18.28■□□□□ 0.52
POLR3DP05423 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.28■□□□□ 0.52
POLR3DP05423 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.28■□□□□ 0.52
POLR3DP05423 AC025279.2-201ENST00000569730 653 ntBASIC18.28■□□□□ 0.52
POLR3DP05423 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.28■□□□□ 0.52
POLR3DP05423 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR3DP05423 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
POLR3DP05423 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
POLR3DP05423 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR3DP05423 AC007787.1-201ENST00000588095 1583 ntBASIC18.28■□□□□ 0.52
POLR3DP05423 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR3DP05423 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR3DP05423 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR3DP05423 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.28■□□□□ 0.52
POLR3DP05423 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
POLR3DP05423 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR3DP05423 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
POLR3DP05423 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR3DP05423 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
POLR3DP05423 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
POLR3DP05423 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR3DP05423 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR3DP05423 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.28■□□□□ 0.52
POLR3DP05423 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR3DP05423 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
POLR3DP05423 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
POLR3DP05423 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
POLR3DP05423 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.27■□□□□ 0.52
POLR3DP05423 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
POLR3DP05423 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
POLR3DP05423 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
POLR3DP05423 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms