Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGN1P05114 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
HMGN1P05114 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HMGN1P05114 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.94□□□□□ -0.18
HMGN1P05114 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.94□□□□□ -0.18
HMGN1P05114 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.94□□□□□ -0.18
HMGN1P05114 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.94□□□□□ -0.18
HMGN1P05114 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.94□□□□□ -0.18
HMGN1P05114 RN7SL828P-201ENST00000607615 303 ntBASIC13.94□□□□□ -0.18
HMGN1P05114 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
HMGN1P05114 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.94□□□□□ -0.18
HMGN1P05114 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.94□□□□□ -0.18
HMGN1P05114 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.94□□□□□ -0.18
HMGN1P05114 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.94□□□□□ -0.18
HMGN1P05114 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.94□□□□□ -0.18
HMGN1P05114 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGN1P05114 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGN1P05114 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGN1P05114 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HMGN1P05114 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGN1P05114 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGN1P05114 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGN1P05114 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.93□□□□□ -0.18
HMGN1P05114 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
HMGN1P05114 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMGN1P05114 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HMGN1P05114 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HMGN1P05114 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMGN1P05114 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
HMGN1P05114 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
HMGN1P05114 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.93□□□□□ -0.18
HMGN1P05114 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
HMGN1P05114 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMGN1P05114 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.93□□□□□ -0.18
HMGN1P05114 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HMGN1P05114 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMGN1P05114 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
HMGN1P05114 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMGN1P05114 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMGN1P05114 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
HMGN1P05114 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.93□□□□□ -0.18
HMGN1P05114 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.93□□□□□ -0.18
HMGN1P05114 HTR5BP-201ENST00000430851 1154 ntBASIC13.93□□□□□ -0.18
HMGN1P05114 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HMGN1P05114 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
HMGN1P05114 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.93□□□□□ -0.18
HMGN1P05114 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.93□□□□□ -0.18
HMGN1P05114 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.93□□□□□ -0.18
HMGN1P05114 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HMGN1P05114 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
HMGN1P05114 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
HMGN1P05114 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.93□□□□□ -0.18
HMGN1P05114 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.93□□□□□ -0.18
HMGN1P05114 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
HMGN1P05114 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.93□□□□□ -0.18
HMGN1P05114 AL133215.2-201ENST00000609242 977 ntBASIC13.93□□□□□ -0.18
HMGN1P05114 AC120114.3-201ENST00000611923 658 ntBASIC13.93□□□□□ -0.18
HMGN1P05114 AC007967.4-201ENST00000614700 386 ntBASIC13.93□□□□□ -0.18
HMGN1P05114 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
HMGN1P05114 MIR6069-201ENST00000620069 79 ntBASIC13.93□□□□□ -0.18
HMGN1P05114 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HMGN1P05114 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HMGN1P05114 AC113367.3-201ENST00000508316 1912 ntBASIC13.93□□□□□ -0.18
HMGN1P05114 BX640514.1-201ENST00000583223 1918 ntBASIC13.93□□□□□ -0.18
HMGN1P05114 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
HMGN1P05114 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMGN1P05114 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMGN1P05114 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.93□□□□□ -0.18
HMGN1P05114 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMGN1P05114 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.93□□□□□ -0.18
HMGN1P05114 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMGN1P05114 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMGN1P05114 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HMGN1P05114 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.93□□□□□ -0.18
HMGN1P05114 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMGN1P05114 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.93□□□□□ -0.18
HMGN1P05114 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HMGN1P05114 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMGN1P05114 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.93□□□□□ -0.18
HMGN1P05114 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
HMGN1P05114 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HMGN1P05114 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HMGN1P05114 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HMGN1P05114 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMGN1P05114 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMGN1P05114 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMGN1P05114 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HMGN1P05114 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMGN1P05114 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.92□□□□□ -0.18
HMGN1P05114 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HMGN1P05114 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HMGN1P05114 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
HMGN1P05114 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
HMGN1P05114 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.92□□□□□ -0.18
HMGN1P05114 AC139749.1-202ENST00000617529 3139 ntBASIC13.92□□□□□ -0.18
HMGN1P05114 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HMGN1P05114 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HMGN1P05114 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.92□□□□□ -0.18
HMGN1P05114 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.92□□□□□ -0.18
HMGN1P05114 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms