Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TIMP1P01033 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TIMP1P01033 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.26■□□□□ 0.19
TIMP1P01033 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC16.26■□□□□ 0.19
TIMP1P01033 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TIMP1P01033 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TIMP1P01033 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TIMP1P01033 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.25■□□□□ 0.19
TIMP1P01033 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TIMP1P01033 KRT18P9-201ENST00000604826 1300 ntBASIC16.25■□□□□ 0.19
TIMP1P01033 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TIMP1P01033 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TIMP1P01033 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TIMP1P01033 AC080080.1-201ENST00000625121 2420 ntBASIC16.25■□□□□ 0.19
TIMP1P01033 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TIMP1P01033 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TIMP1P01033 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TIMP1P01033 NDUFS6P1-201ENST00000485187 316 ntBASIC16.25■□□□□ 0.19
TIMP1P01033 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.25■□□□□ 0.19
TIMP1P01033 AC006122.1-201ENST00000493323 440 ntBASIC16.25■□□□□ 0.19
TIMP1P01033 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC16.25■□□□□ 0.19
TIMP1P01033 ALG3P1-201ENST00000508806 1114 ntBASIC16.25■□□□□ 0.19
TIMP1P01033 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC16.25■□□□□ 0.19
TIMP1P01033 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TIMP1P01033 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC16.25■□□□□ 0.19
TIMP1P01033 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.25■□□□□ 0.19
TIMP1P01033 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TIMP1P01033 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TIMP1P01033 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TIMP1P01033 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TIMP1P01033 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TIMP1P01033 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TIMP1P01033 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.25■□□□□ 0.19
TIMP1P01033 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.25■□□□□ 0.19
TIMP1P01033 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TIMP1P01033 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.25■□□□□ 0.19
TIMP1P01033 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TIMP1P01033 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.25■□□□□ 0.19
TIMP1P01033 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.25■□□□□ 0.19
TIMP1P01033 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TIMP1P01033 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TIMP1P01033 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.25■□□□□ 0.19
TIMP1P01033 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TIMP1P01033 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TIMP1P01033 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TIMP1P01033 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.25■□□□□ 0.19
TIMP1P01033 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.25■□□□□ 0.19
TIMP1P01033 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TIMP1P01033 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TIMP1P01033 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TIMP1P01033 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TIMP1P01033 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TIMP1P01033 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TIMP1P01033 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.24■□□□□ 0.19
TIMP1P01033 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TIMP1P01033 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.24■□□□□ 0.19
TIMP1P01033 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TIMP1P01033 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TIMP1P01033 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TIMP1P01033 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.24■□□□□ 0.19
TIMP1P01033 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TIMP1P01033 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TIMP1P01033 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TIMP1P01033 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.24■□□□□ 0.19
TIMP1P01033 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TIMP1P01033 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TIMP1P01033 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TIMP1P01033 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.24■□□□□ 0.19
TIMP1P01033 MIR557-201ENST00000385239 98 ntBASIC16.24■□□□□ 0.19
TIMP1P01033 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TIMP1P01033 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TIMP1P01033 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.24■□□□□ 0.19
TIMP1P01033 CICP12-201ENST00000455801 843 ntBASIC16.24■□□□□ 0.19
TIMP1P01033 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TIMP1P01033 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TIMP1P01033 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
TIMP1P01033 MIR4522-201ENST00000584932 87 ntBASIC16.24■□□□□ 0.19
TIMP1P01033 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC16.24■□□□□ 0.19
TIMP1P01033 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.24■□□□□ 0.19
TIMP1P01033 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.24■□□□□ 0.19
TIMP1P01033 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TIMP1P01033 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TIMP1P01033 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TIMP1P01033 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TIMP1P01033 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.24■□□□□ 0.19
TIMP1P01033 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.24■□□□□ 0.19
TIMP1P01033 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TIMP1P01033 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.24■□□□□ 0.19
TIMP1P01033 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TIMP1P01033 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TIMP1P01033 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
TIMP1P01033 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TIMP1P01033 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMP1P01033 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMP1P01033 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.23■□□□□ 0.19
TIMP1P01033 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMP1P01033 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TIMP1P01033 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.23■□□□□ 0.19
TIMP1P01033 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.23■□□□□ 0.19
TIMP1P01033 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms