Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SIX6O95475 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC12.88□□□□□ -0.35
SIX6O95475 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SIX6O95475 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC12.88□□□□□ -0.35
SIX6O95475 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SIX6O95475 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC12.88□□□□□ -0.35
SIX6O95475 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC12.88□□□□□ -0.35
SIX6O95475 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SIX6O95475 CFL1-202ENST00000524553 860 ntTSL 2 BASIC12.88□□□□□ -0.35
SIX6O95475 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.88□□□□□ -0.35
SIX6O95475 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC12.88□□□□□ -0.35
SIX6O95475 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.88□□□□□ -0.35
SIX6O95475 IL11-204ENST00000590625 1028 ntTSL 2 BASIC12.88□□□□□ -0.35
SIX6O95475 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SIX6O95475 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SIX6O95475 AL450472.2-201ENST00000603663 1156 ntBASIC12.88□□□□□ -0.35
SIX6O95475 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SIX6O95475 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SIX6O95475 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SIX6O95475 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SIX6O95475 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SIX6O95475 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
SIX6O95475 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SIX6O95475 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SIX6O95475 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.88□□□□□ -0.35
SIX6O95475 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SIX6O95475 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SIX6O95475 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.88□□□□□ -0.35
SIX6O95475 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.88□□□□□ -0.35
SIX6O95475 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.88□□□□□ -0.35
SIX6O95475 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SIX6O95475 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.88□□□□□ -0.35
SIX6O95475 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SIX6O95475 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.88□□□□□ -0.35
SIX6O95475 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
SIX6O95475 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
SIX6O95475 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.88□□□□□ -0.35
SIX6O95475 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC12.88□□□□□ -0.35
SIX6O95475 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SIX6O95475 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC12.88□□□□□ -0.35
SIX6O95475 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
SIX6O95475 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SIX6O95475 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.87□□□□□ -0.35
SIX6O95475 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SIX6O95475 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.87□□□□□ -0.35
SIX6O95475 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SIX6O95475 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SIX6O95475 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SIX6O95475 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SIX6O95475 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SIX6O95475 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.87□□□□□ -0.35
SIX6O95475 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SIX6O95475 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SIX6O95475 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SIX6O95475 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SIX6O95475 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SIX6O95475 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SIX6O95475 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SIX6O95475 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.87□□□□□ -0.35
SIX6O95475 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SIX6O95475 AC104076.2-201ENST00000448912 469 ntBASIC12.87□□□□□ -0.35
SIX6O95475 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
SIX6O95475 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.87□□□□□ -0.35
SIX6O95475 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC12.87□□□□□ -0.35
SIX6O95475 AC022616.7-201ENST00000525383 220 ntBASIC12.87□□□□□ -0.35
SIX6O95475 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SIX6O95475 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC12.87□□□□□ -0.35
SIX6O95475 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.87□□□□□ -0.35
SIX6O95475 SART3-203ENST00000546611 1184 ntBASIC12.87□□□□□ -0.35
SIX6O95475 AC011467.4-201ENST00000594891 528 ntBASIC12.87□□□□□ -0.35
SIX6O95475 FHL2-212ENST00000607522 759 ntTSL 2 BASIC12.87□□□□□ -0.35
SIX6O95475 ACTL9-202ENST00000612068 1252 ntBASIC12.87□□□□□ -0.35
SIX6O95475 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SIX6O95475 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SIX6O95475 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SIX6O95475 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SIX6O95475 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.87□□□□□ -0.35
SIX6O95475 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SIX6O95475 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.87□□□□□ -0.35
SIX6O95475 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SIX6O95475 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SIX6O95475 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SIX6O95475 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SIX6O95475 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SIX6O95475 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SIX6O95475 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SIX6O95475 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SIX6O95475 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SIX6O95475 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SIX6O95475 PMS2P7-201ENST00000506558 1336 ntBASIC12.87□□□□□ -0.35
SIX6O95475 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.87□□□□□ -0.35
SIX6O95475 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SIX6O95475 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SIX6O95475 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SIX6O95475 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.86□□□□□ -0.35
SIX6O95475 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.86□□□□□ -0.35
SIX6O95475 AC138969.3-201ENST00000546612 1459 ntBASIC12.86□□□□□ -0.35
SIX6O95475 AC138932.2-201ENST00000548268 1459 ntBASIC12.86□□□□□ -0.35
SIX6O95475 AC126755.4-201ENST00000549796 1459 ntBASIC12.86□□□□□ -0.35
SIX6O95475 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms