Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.31■□□□□ 0.04
NDUFS3O75489 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.31■□□□□ 0.04
NDUFS3O75489 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NDUFS3O75489 GNAQP1-201ENST00000444815 1067 ntBASIC15.31■□□□□ 0.04
NDUFS3O75489 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.31■□□□□ 0.04
NDUFS3O75489 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.31■□□□□ 0.04
NDUFS3O75489 RN7SL399P-201ENST00000471648 279 ntBASIC15.31■□□□□ 0.04
NDUFS3O75489 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.31■□□□□ 0.04
NDUFS3O75489 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.31■□□□□ 0.04
NDUFS3O75489 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.31■□□□□ 0.04
NDUFS3O75489 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.31■□□□□ 0.04
NDUFS3O75489 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.31■□□□□ 0.04
NDUFS3O75489 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
NDUFS3O75489 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS3O75489 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS3O75489 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS3O75489 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS3O75489 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
NDUFS3O75489 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
NDUFS3O75489 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS3O75489 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS3O75489 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS3O75489 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS3O75489 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NDUFS3O75489 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NDUFS3O75489 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.31■□□□□ 0.04
NDUFS3O75489 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS3O75489 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS3O75489 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS3O75489 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NDUFS3O75489 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS3O75489 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.3■□□□□ 0.04
NDUFS3O75489 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
NDUFS3O75489 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS3O75489 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.3■□□□□ 0.04
NDUFS3O75489 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS3O75489 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NDUFS3O75489 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS3O75489 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.3■□□□□ 0.04
NDUFS3O75489 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS3O75489 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS3O75489 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS3O75489 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS3O75489 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS3O75489 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS3O75489 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS3O75489 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS3O75489 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NDUFS3O75489 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
NDUFS3O75489 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NDUFS3O75489 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS3O75489 AC104457.1-201ENST00000401024 814 ntBASIC15.3■□□□□ 0.04
NDUFS3O75489 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS3O75489 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.3■□□□□ 0.04
NDUFS3O75489 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.3■□□□□ 0.04
NDUFS3O75489 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS3O75489 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.3■□□□□ 0.04
NDUFS3O75489 AC004066.1-201ENST00000502488 802 ntBASIC15.3■□□□□ 0.04
NDUFS3O75489 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.3■□□□□ 0.04
NDUFS3O75489 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.3■□□□□ 0.04
NDUFS3O75489 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.3■□□□□ 0.04
NDUFS3O75489 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.3■□□□□ 0.04
NDUFS3O75489 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS3O75489 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS3O75489 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS3O75489 SAMD11P1-201ENST00000571429 661 ntBASIC15.3■□□□□ 0.04
NDUFS3O75489 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NDUFS3O75489 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS3O75489 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
NDUFS3O75489 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.3■□□□□ 0.04
NDUFS3O75489 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.3■□□□□ 0.04
NDUFS3O75489 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.3■□□□□ 0.04
NDUFS3O75489 AC004790.1-201ENST00000612686 536 ntBASIC15.3■□□□□ 0.04
NDUFS3O75489 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.3■□□□□ 0.04
NDUFS3O75489 AC009118.2-201ENST00000613275 655 ntBASIC15.3■□□□□ 0.04
NDUFS3O75489 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
NDUFS3O75489 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.3■□□□□ 0.04
NDUFS3O75489 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS3O75489 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS3O75489 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS3O75489 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.3■□□□□ 0.04
NDUFS3O75489 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.3■□□□□ 0.04
NDUFS3O75489 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NDUFS3O75489 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NDUFS3O75489 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS3O75489 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS3O75489 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS3O75489 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.3■□□□□ 0.04
NDUFS3O75489 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS3O75489 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS3O75489 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFS3O75489 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.29■□□□□ 0.04
NDUFS3O75489 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.29■□□□□ 0.04
NDUFS3O75489 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
NDUFS3O75489 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.29■□□□□ 0.04
NDUFS3O75489 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.29■□□□□ 0.04
NDUFS3O75489 REXO1L4P-201ENST00000605109 1937 ntBASIC15.29■□□□□ 0.04
NDUFS3O75489 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFS3O75489 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFS3O75489 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms