Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
CTNND1O60716 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.78■□□□□ 0.44
CTNND1O60716 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CTNND1O60716 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.78■□□□□ 0.44
CTNND1O60716 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTNND1O60716 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTNND1O60716 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTNND1O60716 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTNND1O60716 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTNND1O60716 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.77■□□□□ 0.44
CTNND1O60716 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.77■□□□□ 0.44
CTNND1O60716 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CTNND1O60716 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTNND1O60716 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTNND1O60716 FKBP4P6-201ENST00000457486 1332 ntBASIC17.77■□□□□ 0.44
CTNND1O60716 AL360270.3-201ENST00000609118 1348 ntBASIC17.77■□□□□ 0.44
CTNND1O60716 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTNND1O60716 KRT8P19-201ENST00000551916 1455 ntBASIC17.77■□□□□ 0.44
CTNND1O60716 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTNND1O60716 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTNND1O60716 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTNND1O60716 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTNND1O60716 DPM3-202ENST00000368399 517 ntBASIC17.77■□□□□ 0.44
CTNND1O60716 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTNND1O60716 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC17.77■□□□□ 0.44
CTNND1O60716 AC021723.1-201ENST00000486306 515 ntBASIC17.77■□□□□ 0.44
CTNND1O60716 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTNND1O60716 AC005740.2-201ENST00000511085 419 ntBASIC17.77■□□□□ 0.44
CTNND1O60716 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTNND1O60716 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.77■□□□□ 0.44
CTNND1O60716 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17.77■□□□□ 0.44
CTNND1O60716 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC17.77■□□□□ 0.44
CTNND1O60716 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.77■□□□□ 0.44
CTNND1O60716 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTNND1O60716 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTNND1O60716 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTNND1O60716 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.77■□□□□ 0.43
CTNND1O60716 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
CTNND1O60716 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTNND1O60716 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTNND1O60716 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTNND1O60716 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CTNND1O60716 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTNND1O60716 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CTNND1O60716 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CTNND1O60716 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.76■□□□□ 0.43
CTNND1O60716 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTNND1O60716 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNND1O60716 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CTNND1O60716 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNND1O60716 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNND1O60716 AC103702.1-201ENST00000548801 2630 ntBASIC17.76■□□□□ 0.43
CTNND1O60716 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNND1O60716 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTNND1O60716 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CTNND1O60716 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTNND1O60716 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNND1O60716 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNND1O60716 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNND1O60716 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.76■□□□□ 0.43
CTNND1O60716 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CTNND1O60716 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTNND1O60716 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.76■□□□□ 0.43
CTNND1O60716 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTNND1O60716 SPTLC1P5-201ENST00000450718 252 ntBASIC17.76■□□□□ 0.43
CTNND1O60716 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.76■□□□□ 0.43
CTNND1O60716 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.76■□□□□ 0.43
CTNND1O60716 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.76■□□□□ 0.43
CTNND1O60716 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.76■□□□□ 0.43
CTNND1O60716 HCG18-245ENST00000602550 559 ntTSL 4 BASIC17.76■□□□□ 0.43
CTNND1O60716 AP001505.2-201ENST00000616815 443 ntBASIC17.76■□□□□ 0.43
CTNND1O60716 AC091812.3-201ENST00000621362 345 ntBASIC17.76■□□□□ 0.43
CTNND1O60716 CU633904.3-201ENST00000624042 1029 ntBASIC17.76■□□□□ 0.43
CTNND1O60716 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNND1O60716 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNND1O60716 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CTNND1O60716 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNND1O60716 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTNND1O60716 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNND1O60716 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CTNND1O60716 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNND1O60716 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNND1O60716 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
CTNND1O60716 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CTNND1O60716 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CTNND1O60716 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.76■□□□□ 0.43
CTNND1O60716 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNND1O60716 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
CTNND1O60716 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CTNND1O60716 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.76■□□□□ 0.43
CTNND1O60716 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNND1O60716 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNND1O60716 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNND1O60716 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNND1O60716 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CTNND1O60716 AL513477.1-201ENST00000602865 2407 ntBASIC17.76■□□□□ 0.43
CTNND1O60716 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNND1O60716 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTNND1O60716 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTNND1O60716 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms