Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.19■□□□□ 0.34
ACTN4O43707 AC104794.3-201ENST00000566840 1248 ntBASIC17.19■□□□□ 0.34
ACTN4O43707 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.19■□□□□ 0.34
ACTN4O43707 AP001002.2-201ENST00000625137 386 ntBASIC17.19■□□□□ 0.34
ACTN4O43707 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.19■□□□□ 0.34
ACTN4O43707 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.19■□□□□ 0.34
ACTN4O43707 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.19■□□□□ 0.34
ACTN4O43707 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 DRD5P1-201ENST00000456605 1438 ntBASIC17.19■□□□□ 0.34
ACTN4O43707 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
ACTN4O43707 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ACTN4O43707 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.19■□□□□ 0.34
ACTN4O43707 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ACTN4O43707 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACTN4O43707 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACTN4O43707 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ACTN4O43707 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACTN4O43707 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC17.18■□□□□ 0.34
ACTN4O43707 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC17.18■□□□□ 0.34
ACTN4O43707 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.18■□□□□ 0.34
ACTN4O43707 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.18■□□□□ 0.34
ACTN4O43707 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACTN4O43707 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
ACTN4O43707 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.18■□□□□ 0.34
ACTN4O43707 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.18■□□□□ 0.34
ACTN4O43707 AC126755.1-201ENST00000525846 6405 ntBASIC17.18■□□□□ 0.34
ACTN4O43707 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ACTN4O43707 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACTN4O43707 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACTN4O43707 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACTN4O43707 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ACTN4O43707 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.18■□□□□ 0.34
ACTN4O43707 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ACTN4O43707 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACTN4O43707 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
ACTN4O43707 MTATP6P19-201ENST00000413797 659 ntBASIC17.18■□□□□ 0.34
ACTN4O43707 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ACTN4O43707 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACTN4O43707 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACTN4O43707 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.18■□□□□ 0.34
ACTN4O43707 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.18■□□□□ 0.34
ACTN4O43707 AL662799.1-202ENST00000614205 422 ntBASIC17.18■□□□□ 0.34
ACTN4O43707 AC093512.1-201ENST00000617969 520 ntBASIC17.18■□□□□ 0.34
ACTN4O43707 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
ACTN4O43707 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.18■□□□□ 0.34
ACTN4O43707 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
ACTN4O43707 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACTN4O43707 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC17.18■□□□□ 0.34
ACTN4O43707 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC17.18■□□□□ 0.34
ACTN4O43707 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
ACTN4O43707 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ACTN4O43707 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ACTN4O43707 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACTN4O43707 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACTN4O43707 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACTN4O43707 AC093525.8-201ENST00000624099 1342 ntBASIC17.18■□□□□ 0.34
ACTN4O43707 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACTN4O43707 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACTN4O43707 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
ACTN4O43707 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
ACTN4O43707 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACTN4O43707 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACTN4O43707 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ACTN4O43707 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACTN4O43707 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.17■□□□□ 0.34
ACTN4O43707 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACTN4O43707 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACTN4O43707 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACTN4O43707 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
ACTN4O43707 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
ACTN4O43707 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACTN4O43707 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACTN4O43707 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ACTN4O43707 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.17■□□□□ 0.34
ACTN4O43707 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.17■□□□□ 0.34
ACTN4O43707 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC17.17■□□□□ 0.34
ACTN4O43707 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.17■□□□□ 0.34
ACTN4O43707 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.17■□□□□ 0.34
ACTN4O43707 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.17■□□□□ 0.34
ACTN4O43707 HLA-K-203ENST00000430151 1046 ntBASIC17.17■□□□□ 0.34
ACTN4O43707 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ACTN4O43707 AC004066.1-201ENST00000502488 802 ntBASIC17.17■□□□□ 0.34
ACTN4O43707 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.17■□□□□ 0.34
ACTN4O43707 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.17■□□□□ 0.34
ACTN4O43707 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ACTN4O43707 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.17■□□□□ 0.34
ACTN4O43707 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC17.17■□□□□ 0.34
ACTN4O43707 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.17■□□□□ 0.34
ACTN4O43707 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.17■□□□□ 0.34
ACTN4O43707 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms