Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HDAC3O15379 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.95□□□□□ -0.02
HDAC3O15379 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HDAC3O15379 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HDAC3O15379 ST20-AS1-201ENST00000560255 4223 ntBASIC14.95□□□□□ -0.02
HDAC3O15379 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HDAC3O15379 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.95□□□□□ -0.02
HDAC3O15379 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HDAC3O15379 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HDAC3O15379 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HDAC3O15379 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HDAC3O15379 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.95□□□□□ -0.02
HDAC3O15379 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
HDAC3O15379 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.95□□□□□ -0.02
HDAC3O15379 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HDAC3O15379 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.95□□□□□ -0.02
HDAC3O15379 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HDAC3O15379 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.95□□□□□ -0.02
HDAC3O15379 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HDAC3O15379 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HDAC3O15379 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HDAC3O15379 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.95□□□□□ -0.02
HDAC3O15379 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HDAC3O15379 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.95□□□□□ -0.02
HDAC3O15379 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.95□□□□□ -0.02
HDAC3O15379 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HDAC3O15379 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.95□□□□□ -0.02
HDAC3O15379 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.95□□□□□ -0.02
HDAC3O15379 RN7SL828P-201ENST00000607615 303 ntBASIC14.95□□□□□ -0.02
HDAC3O15379 C20orf181-201ENST00000623918 480 ntBASIC14.95□□□□□ -0.02
HDAC3O15379 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HDAC3O15379 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HDAC3O15379 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HDAC3O15379 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.95□□□□□ -0.02
HDAC3O15379 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HDAC3O15379 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HDAC3O15379 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HDAC3O15379 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HDAC3O15379 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HDAC3O15379 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.95□□□□□ -0.02
HDAC3O15379 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.95□□□□□ -0.02
HDAC3O15379 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HDAC3O15379 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HDAC3O15379 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
HDAC3O15379 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.94□□□□□ -0.02
HDAC3O15379 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.94□□□□□ -0.02
HDAC3O15379 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.94□□□□□ -0.02
HDAC3O15379 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
HDAC3O15379 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
HDAC3O15379 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HDAC3O15379 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HDAC3O15379 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.94□□□□□ -0.02
HDAC3O15379 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HDAC3O15379 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HDAC3O15379 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HDAC3O15379 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HDAC3O15379 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HDAC3O15379 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
HDAC3O15379 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HDAC3O15379 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HDAC3O15379 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.94□□□□□ -0.02
HDAC3O15379 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.94□□□□□ -0.02
HDAC3O15379 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.94□□□□□ -0.02
HDAC3O15379 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.94□□□□□ -0.02
HDAC3O15379 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.94□□□□□ -0.02
HDAC3O15379 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HDAC3O15379 AC003101.2-201ENST00000612557 442 ntBASIC14.94□□□□□ -0.02
HDAC3O15379 BX640515.1-201ENST00000617215 977 ntBASIC14.94□□□□□ -0.02
HDAC3O15379 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HDAC3O15379 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.94□□□□□ -0.02
HDAC3O15379 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HDAC3O15379 Z97205.2-201ENST00000564697 1639 ntBASIC14.94□□□□□ -0.02
HDAC3O15379 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HDAC3O15379 AL035456.1-201ENST00000456064 1369 ntBASIC14.94□□□□□ -0.02
HDAC3O15379 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
HDAC3O15379 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HDAC3O15379 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HDAC3O15379 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HDAC3O15379 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HDAC3O15379 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HDAC3O15379 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HDAC3O15379 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HDAC3O15379 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HDAC3O15379 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.94□□□□□ -0.02
HDAC3O15379 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.94□□□□□ -0.02
HDAC3O15379 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
HDAC3O15379 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
HDAC3O15379 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HDAC3O15379 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
HDAC3O15379 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
HDAC3O15379 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HDAC3O15379 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HDAC3O15379 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HDAC3O15379 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HDAC3O15379 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.93□□□□□ -0.02
HDAC3O15379 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
HDAC3O15379 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
HDAC3O15379 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HDAC3O15379 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
HDAC3O15379 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms