Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
PFDN6O15212 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN6O15212 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.41■□□□□ 0.06
PFDN6O15212 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN6O15212 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN6O15212 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
PFDN6O15212 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN6O15212 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.41■□□□□ 0.06
PFDN6O15212 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN6O15212 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.41■□□□□ 0.06
PFDN6O15212 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.41■□□□□ 0.06
PFDN6O15212 MEP1AP4-201ENST00000423244 1087 ntBASIC15.41■□□□□ 0.06
PFDN6O15212 TSSK5P-201ENST00000423978 907 ntBASIC15.41■□□□□ 0.06
PFDN6O15212 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PFDN6O15212 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.41■□□□□ 0.06
PFDN6O15212 RNA5SP421-201ENST00000516864 134 ntBASIC15.41■□□□□ 0.06
PFDN6O15212 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.41■□□□□ 0.06
PFDN6O15212 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.41■□□□□ 0.06
PFDN6O15212 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN6O15212 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN6O15212 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.41■□□□□ 0.06
PFDN6O15212 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.41■□□□□ 0.06
PFDN6O15212 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
PFDN6O15212 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN6O15212 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN6O15212 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN6O15212 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN6O15212 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PFDN6O15212 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN6O15212 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN6O15212 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN6O15212 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.41■□□□□ 0.06
PFDN6O15212 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN6O15212 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN6O15212 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN6O15212 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN6O15212 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN6O15212 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN6O15212 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.4■□□□□ 0.06
PFDN6O15212 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN6O15212 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.4■□□□□ 0.06
PFDN6O15212 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN6O15212 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.4■□□□□ 0.06
PFDN6O15212 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.4■□□□□ 0.06
PFDN6O15212 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.4■□□□□ 0.06
PFDN6O15212 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN6O15212 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN6O15212 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN6O15212 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN6O15212 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
PFDN6O15212 AP002414.2-201ENST00000591780 3365 ntBASIC15.4■□□□□ 0.06
PFDN6O15212 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.4■□□□□ 0.06
PFDN6O15212 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN6O15212 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.4■□□□□ 0.06
PFDN6O15212 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN6O15212 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PFDN6O15212 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN6O15212 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN6O15212 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN6O15212 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.4■□□□□ 0.06
PFDN6O15212 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN6O15212 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.4■□□□□ 0.06
PFDN6O15212 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN6O15212 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.4■□□□□ 0.06
PFDN6O15212 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN6O15212 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN6O15212 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN6O15212 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN6O15212 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.4■□□□□ 0.06
PFDN6O15212 AC036164.1-201ENST00000570544 333 ntBASIC15.4■□□□□ 0.06
PFDN6O15212 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.4■□□□□ 0.06
PFDN6O15212 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.4■□□□□ 0.06
PFDN6O15212 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.4■□□□□ 0.06
PFDN6O15212 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.4■□□□□ 0.06
PFDN6O15212 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN6O15212 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN6O15212 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.4■□□□□ 0.06
PFDN6O15212 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.4■□□□□ 0.06
PFDN6O15212 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN6O15212 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN6O15212 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN6O15212 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN6O15212 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PFDN6O15212 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.39■□□□□ 0.05
PFDN6O15212 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN6O15212 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN6O15212 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN6O15212 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PFDN6O15212 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN6O15212 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN6O15212 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN6O15212 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.39■□□□□ 0.05
PFDN6O15212 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN6O15212 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN6O15212 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PFDN6O15212 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PFDN6O15212 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.39■□□□□ 0.05
PFDN6O15212 CICP11-201ENST00000434745 2827 ntBASIC15.39■□□□□ 0.05
PFDN6O15212 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.39■□□□□ 0.05
PFDN6O15212 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms