Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 SNHG14-208ENST00000453082 6087 ntTSL 5 BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
CHKB-CPT1BH3BT56 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 ZNF471-201ENST00000308031 6287 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 NWD1-205ENST00000549814 6614 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 RGS3-204ENST00000350696 4387 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 PNPO-217ENST00000642017 3465 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 PNPLA6-203ENST00000450331 4457 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 ERP44-201ENST00000262455 4854 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 FUT8-AS1-201ENST00000621019 1521 ntBASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 PRRC2B-202ENST00000357304 11042 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 EGFR-211ENST00000638463 4735 ntTSL 5 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 DNAH2-203ENST00000572933 14955 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 UNC79-205ENST00000555664 8484 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 AC006277.1-201ENST00000624348 1610 ntBASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 EFR3B-204ENST00000403714 7434 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 SLC25A1P4-201ENST00000567977 778 ntBASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 PCDHGA8-201ENST00000398604 4605 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 KIRREL1-203ENST00000368172 6870 ntTSL 2 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 SLC22A20-204ENST00000530038 1673 ntBASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 MEF2C-209ENST00000504921 7561 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 DNMBP-201ENST00000324109 6400 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 MID1-203ENST00000380780 6195 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 PKNOX1-201ENST00000291547 5003 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 ULK4-201ENST00000301831 4613 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CHKB-CPT1BH3BT56 RGL1-201ENST00000304685 5100 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms