Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PLEKHD1A6NEE1 AC003102.2-201ENST00000589195 1469 ntBASIC23.14■■□□□ 1.29
PLEKHD1A6NEE1 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PLEKHD1A6NEE1 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PLEKHD1A6NEE1 RPL8P2-201ENST00000430538 502 ntBASIC23.14■■□□□ 1.29
PLEKHD1A6NEE1 CICP12-201ENST00000455801 843 ntBASIC23.14■■□□□ 1.29
PLEKHD1A6NEE1 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC23.14■■□□□ 1.29
PLEKHD1A6NEE1 NAT9-220ENST00000582870 896 ntTSL 5 BASIC23.14■■□□□ 1.29
PLEKHD1A6NEE1 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC23.14■■□□□ 1.29
PLEKHD1A6NEE1 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC23.14■■□□□ 1.29
PLEKHD1A6NEE1 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC23.14■■□□□ 1.29
PLEKHD1A6NEE1 AC027601.3-201ENST00000622907 509 ntBASIC23.14■■□□□ 1.29
PLEKHD1A6NEE1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
PLEKHD1A6NEE1 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PLEKHD1A6NEE1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PLEKHD1A6NEE1 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PLEKHD1A6NEE1 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC23.14■■□□□ 1.29
PLEKHD1A6NEE1 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC23.14■■□□□ 1.29
PLEKHD1A6NEE1 F11R-206ENST00000621309 4770 ntTSL 5 BASIC23.14■■□□□ 1.29
PLEKHD1A6NEE1 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PLEKHD1A6NEE1 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
PLEKHD1A6NEE1 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PLEKHD1A6NEE1 AL139384.1-201ENST00000612143 3047 ntBASIC23.14■■□□□ 1.29
PLEKHD1A6NEE1 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
PLEKHD1A6NEE1 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC23.13■■□□□ 1.29
PLEKHD1A6NEE1 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC23.13■■□□□ 1.29
PLEKHD1A6NEE1 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PLEKHD1A6NEE1 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
PLEKHD1A6NEE1 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC23.13■■□□□ 1.29
PLEKHD1A6NEE1 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC23.13■■□□□ 1.29
PLEKHD1A6NEE1 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
PLEKHD1A6NEE1 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PLEKHD1A6NEE1 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PLEKHD1A6NEE1 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
PLEKHD1A6NEE1 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC23.13■■□□□ 1.29
PLEKHD1A6NEE1 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC23.13■■□□□ 1.29
PLEKHD1A6NEE1 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PLEKHD1A6NEE1 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
PLEKHD1A6NEE1 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC23.13■■□□□ 1.29
PLEKHD1A6NEE1 GMFG-209ENST00000600322 622 ntTSL 5 BASIC23.13■■□□□ 1.29
PLEKHD1A6NEE1 BX088702.1-201ENST00000610784 235 ntBASIC23.13■■□□□ 1.29
PLEKHD1A6NEE1 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PLEKHD1A6NEE1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
PLEKHD1A6NEE1 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
PLEKHD1A6NEE1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
PLEKHD1A6NEE1 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC23.13■■□□□ 1.29
PLEKHD1A6NEE1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PLEKHD1A6NEE1 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC23.13■■□□□ 1.29
PLEKHD1A6NEE1 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC23.13■■□□□ 1.29
PLEKHD1A6NEE1 STK26-204ENST00000481105 1835 ntTSL 2 BASIC23.12■■□□□ 1.29
PLEKHD1A6NEE1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PLEKHD1A6NEE1 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC23.12■■□□□ 1.29
PLEKHD1A6NEE1 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PLEKHD1A6NEE1 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
PLEKHD1A6NEE1 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
PLEKHD1A6NEE1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
PLEKHD1A6NEE1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PLEKHD1A6NEE1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PLEKHD1A6NEE1 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
PLEKHD1A6NEE1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC23.12■■□□□ 1.29
PLEKHD1A6NEE1 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PLEKHD1A6NEE1 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PLEKHD1A6NEE1 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PLEKHD1A6NEE1 AP000356.3-201ENST00000382243 753 ntBASIC23.12■■□□□ 1.29
PLEKHD1A6NEE1 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC23.12■■□□□ 1.29
PLEKHD1A6NEE1 HPN-206ENST00000597419 1212 ntTSL 5 BASIC23.12■■□□□ 1.29
PLEKHD1A6NEE1 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC23.12■■□□□ 1.29
PLEKHD1A6NEE1 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PLEKHD1A6NEE1 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PLEKHD1A6NEE1 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PLEKHD1A6NEE1 AC144522.1-201ENST00000625111 1658 ntBASIC23.12■■□□□ 1.29
PLEKHD1A6NEE1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PLEKHD1A6NEE1 OR6D1P-203ENST00000641209 4860 ntBASIC23.12■■□□□ 1.29
PLEKHD1A6NEE1 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PLEKHD1A6NEE1 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PLEKHD1A6NEE1 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PLEKHD1A6NEE1 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PLEKHD1A6NEE1 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PLEKHD1A6NEE1 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC23.11■■□□□ 1.29
PLEKHD1A6NEE1 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PLEKHD1A6NEE1 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC23.11■■□□□ 1.29
PLEKHD1A6NEE1 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PLEKHD1A6NEE1 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PLEKHD1A6NEE1 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PLEKHD1A6NEE1 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PLEKHD1A6NEE1 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PLEKHD1A6NEE1 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC23.11■■□□□ 1.29
PLEKHD1A6NEE1 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PLEKHD1A6NEE1 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC23.11■■□□□ 1.29
PLEKHD1A6NEE1 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PLEKHD1A6NEE1 NCR3-202ENST00000376071 541 ntTSL 5 BASIC23.11■■□□□ 1.29
PLEKHD1A6NEE1 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC23.11■■□□□ 1.29
PLEKHD1A6NEE1 TLE1P1-201ENST00000422965 589 ntBASIC23.11■■□□□ 1.29
PLEKHD1A6NEE1 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC23.11■■□□□ 1.29
PLEKHD1A6NEE1 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC23.11■■□□□ 1.29
PLEKHD1A6NEE1 AC006122.1-201ENST00000493323 440 ntBASIC23.11■■□□□ 1.29
PLEKHD1A6NEE1 CTBP2P4-201ENST00000513884 920 ntBASIC23.11■■□□□ 1.29
PLEKHD1A6NEE1 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC23.11■■□□□ 1.29
PLEKHD1A6NEE1 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC23.11■■□□□ 1.29
PLEKHD1A6NEE1 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms