Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.33□□□□□ -0.27
MBD3L3A6NE82 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
MBD3L3A6NE82 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MBD3L3A6NE82 MROH4P-201ENST00000431302 1578 ntBASIC13.33□□□□□ -0.28
MBD3L3A6NE82 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MBD3L3A6NE82 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.33□□□□□ -0.28
MBD3L3A6NE82 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.33□□□□□ -0.28
MBD3L3A6NE82 C18orf15-201ENST00000623680 2534 ntBASIC13.33□□□□□ -0.28
MBD3L3A6NE82 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
MBD3L3A6NE82 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
MBD3L3A6NE82 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
MBD3L3A6NE82 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.33□□□□□ -0.28
MBD3L3A6NE82 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.33□□□□□ -0.28
MBD3L3A6NE82 BX284668.4-201ENST00000453917 508 ntBASIC13.33□□□□□ -0.28
MBD3L3A6NE82 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.33□□□□□ -0.28
MBD3L3A6NE82 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.33□□□□□ -0.28
MBD3L3A6NE82 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.33□□□□□ -0.28
MBD3L3A6NE82 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.33□□□□□ -0.28
MBD3L3A6NE82 AC002472.3-201ENST00000640124 621 ntBASIC13.33□□□□□ -0.28
MBD3L3A6NE82 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
MBD3L3A6NE82 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.33□□□□□ -0.28
MBD3L3A6NE82 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MBD3L3A6NE82 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
MBD3L3A6NE82 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.33□□□□□ -0.28
MBD3L3A6NE82 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
MBD3L3A6NE82 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
MBD3L3A6NE82 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MBD3L3A6NE82 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
MBD3L3A6NE82 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
MBD3L3A6NE82 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.33□□□□□ -0.28
MBD3L3A6NE82 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.33□□□□□ -0.28
MBD3L3A6NE82 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MBD3L3A6NE82 AL359258.3-201ENST00000622910 2331 ntBASIC13.33□□□□□ -0.28
MBD3L3A6NE82 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.33□□□□□ -0.28
MBD3L3A6NE82 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 AL606495.2-201ENST00000605867 535 ntBASIC13.32□□□□□ -0.28
MBD3L3A6NE82 AL358472.3-201ENST00000608147 415 ntBASIC13.32□□□□□ -0.28
MBD3L3A6NE82 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 AL023803.2-201ENST00000620080 638 ntBASIC13.32□□□□□ -0.28
MBD3L3A6NE82 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 WASH3P-207ENST00000560956 1394 ntBASIC13.32□□□□□ -0.28
MBD3L3A6NE82 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
MBD3L3A6NE82 AP000845.1-201ENST00000581677 2131 ntBASIC13.31□□□□□ -0.28
MBD3L3A6NE82 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 AC011840.2-201ENST00000563063 1520 ntBASIC13.31□□□□□ -0.28
MBD3L3A6NE82 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms