Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CCDC144AA2RUR9 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CCDC144AA2RUR9 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC144AA2RUR9 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC144AA2RUR9 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC144AA2RUR9 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC144AA2RUR9 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 PARP8-206ENST00000503665 572 ntTSL 4 BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 AL645939.5-201ENST00000606834 243 ntBASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC144AA2RUR9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 SLC25A24P2-201ENST00000415059 510 ntBASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 EIF4HP1-201ENST00000453115 687 ntBASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 RNMTL1P1-201ENST00000454103 560 ntBASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 AC106794.1-201ENST00000506935 792 ntBASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 ALG3P1-201ENST00000508806 1114 ntBASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC144AA2RUR9 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC144AA2RUR9 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC144AA2RUR9 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC144AA2RUR9 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC144AA2RUR9 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC144AA2RUR9 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC21.67■■□□□ 1.06
CCDC144AA2RUR9 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC144AA2RUR9 DPM3-202ENST00000368399 517 ntBASIC21.67■■□□□ 1.06
CCDC144AA2RUR9 AC021723.1-201ENST00000486306 515 ntBASIC21.67■■□□□ 1.06
CCDC144AA2RUR9 HNRNPA1P36-201ENST00000521313 955 ntBASIC21.67■■□□□ 1.06
CCDC144AA2RUR9 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC21.67■■□□□ 1.06
CCDC144AA2RUR9 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC21.67■■□□□ 1.06
CCDC144AA2RUR9 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CCDC144AA2RUR9 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CCDC144AA2RUR9 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC144AA2RUR9 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC144AA2RUR9 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC144AA2RUR9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
CCDC144AA2RUR9 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC144AA2RUR9 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC144AA2RUR9 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CCDC144AA2RUR9 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CCDC144AA2RUR9 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC144AA2RUR9 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms