Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HFM1A2PYH4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.15
HFM1A2PYH4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
HFM1A2PYH4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.15
HFM1A2PYH4 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC22.26■■□□□ 1.15
HFM1A2PYH4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
HFM1A2PYH4 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HFM1A2PYH4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
HFM1A2PYH4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HFM1A2PYH4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
HFM1A2PYH4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
HFM1A2PYH4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC22.26■■□□□ 1.15
HFM1A2PYH4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HFM1A2PYH4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC22.26■■□□□ 1.15
HFM1A2PYH4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HFM1A2PYH4 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HFM1A2PYH4 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HFM1A2PYH4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HFM1A2PYH4 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC22.26■■□□□ 1.15
HFM1A2PYH4 AC091804.1-201ENST00000486888 567 ntBASIC22.26■■□□□ 1.15
HFM1A2PYH4 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC22.26■■□□□ 1.15
HFM1A2PYH4 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HFM1A2PYH4 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC22.26■■□□□ 1.15
HFM1A2PYH4 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC22.26■■□□□ 1.15
HFM1A2PYH4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC22.26■■□□□ 1.15
HFM1A2PYH4 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HFM1A2PYH4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
HFM1A2PYH4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC22.26■■□□□ 1.15
HFM1A2PYH4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
HFM1A2PYH4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
HFM1A2PYH4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC22.26■■□□□ 1.15
HFM1A2PYH4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HFM1A2PYH4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC22.26■■□□□ 1.15
HFM1A2PYH4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC22.26■■□□□ 1.15
HFM1A2PYH4 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC22.25■■□□□ 1.15
HFM1A2PYH4 API5-203ENST00000455725 2257 ntTSL 2 BASIC22.25■■□□□ 1.15
HFM1A2PYH4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HFM1A2PYH4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC22.25■■□□□ 1.15
HFM1A2PYH4 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC22.25■■□□□ 1.15
HFM1A2PYH4 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HFM1A2PYH4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
HFM1A2PYH4 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
HFM1A2PYH4 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HFM1A2PYH4 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HFM1A2PYH4 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HFM1A2PYH4 AC004898.1-201ENST00000451057 766 ntBASIC22.25■■□□□ 1.15
HFM1A2PYH4 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC22.25■■□□□ 1.15
HFM1A2PYH4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HFM1A2PYH4 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HFM1A2PYH4 AC243960.2-201ENST00000600996 747 ntBASIC22.25■■□□□ 1.15
HFM1A2PYH4 AC022748.3-201ENST00000621828 275 ntBASIC22.25■■□□□ 1.15
HFM1A2PYH4 AL139099.5-201ENST00000635274 300 ntBASIC22.25■■□□□ 1.15
HFM1A2PYH4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HFM1A2PYH4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC22.25■■□□□ 1.15
HFM1A2PYH4 AC006058.4-201ENST00000624016 1670 ntBASIC22.25■■□□□ 1.15
HFM1A2PYH4 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HFM1A2PYH4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HFM1A2PYH4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
HFM1A2PYH4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC22.25■■□□□ 1.15
HFM1A2PYH4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC22.25■■□□□ 1.15
HFM1A2PYH4 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC22.25■■□□□ 1.15
HFM1A2PYH4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HFM1A2PYH4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HFM1A2PYH4 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HFM1A2PYH4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
HFM1A2PYH4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HFM1A2PYH4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HFM1A2PYH4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HFM1A2PYH4 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
HFM1A2PYH4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC22.24■■□□□ 1.15
HFM1A2PYH4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HFM1A2PYH4 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
HFM1A2PYH4 NDUFAB1P1-201ENST00000404262 460 ntBASIC22.24■■□□□ 1.15
HFM1A2PYH4 PUDPP3-201ENST00000445368 636 ntBASIC22.24■■□□□ 1.15
HFM1A2PYH4 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HFM1A2PYH4 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HFM1A2PYH4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC22.24■■□□□ 1.15
HFM1A2PYH4 AL136301.1-201ENST00000615830 422 ntBASIC22.24■■□□□ 1.15
HFM1A2PYH4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC22.24■■□□□ 1.15
HFM1A2PYH4 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HFM1A2PYH4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HFM1A2PYH4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
HFM1A2PYH4 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HFM1A2PYH4 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC22.24■■□□□ 1.15
HFM1A2PYH4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
HFM1A2PYH4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC22.24■■□□□ 1.15
HFM1A2PYH4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HFM1A2PYH4 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HFM1A2PYH4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC22.24■■□□□ 1.15
HFM1A2PYH4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HFM1A2PYH4 AC011270.2-201ENST00000624293 2550 ntBASIC22.24■■□□□ 1.15
HFM1A2PYH4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HFM1A2PYH4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
HFM1A2PYH4 E2F3P2-201ENST00000447755 1422 ntBASIC22.24■■□□□ 1.15
HFM1A2PYH4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
HFM1A2PYH4 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
HFM1A2PYH4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HFM1A2PYH4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HFM1A2PYH4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
HFM1A2PYH4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms