Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PCDHGB1Q9Y5G3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGB1Q9Y5G3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGB1Q9Y5G3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
PCDHGB1Q9Y5G3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGB1Q9Y5G3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGB1Q9Y5G3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGB1Q9Y5G3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHGB1Q9Y5G3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB1Q9Y5G3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB1Q9Y5G3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB1Q9Y5G3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHGB1Q9Y5G3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB1Q9Y5G3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB1Q9Y5G3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB1Q9Y5G3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB1Q9Y5G3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGB1Q9Y5G3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
PCDHGB1Q9Y5G3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGB1Q9Y5G3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
PCDHGB1Q9Y5G3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGB1Q9Y5G3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PCDHGB1Q9Y5G3 AC127496.7-201ENST00000625110 1798 ntBASIC21.08■□□□□ 0.97
PCDHGB1Q9Y5G3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHGB1Q9Y5G3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGB1Q9Y5G3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGB1Q9Y5G3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGB1Q9Y5G3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGB1Q9Y5G3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGB1Q9Y5G3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.08■□□□□ 0.97
PCDHGB1Q9Y5G3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
PCDHGB1Q9Y5G3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHGB1Q9Y5G3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.08■□□□□ 0.96
PCDHGB1Q9Y5G3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.08■□□□□ 0.96
PCDHGB1Q9Y5G3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHGB1Q9Y5G3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGB1Q9Y5G3 LINC00526-201ENST00000581067 1875 ntBASIC21.07■□□□□ 0.96
PCDHGB1Q9Y5G3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGB1Q9Y5G3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PCDHGB1Q9Y5G3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
PCDHGB1Q9Y5G3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGB1Q9Y5G3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGB1Q9Y5G3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGB1Q9Y5G3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGB1Q9Y5G3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGB1Q9Y5G3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
PCDHGB1Q9Y5G3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGB1Q9Y5G3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGB1Q9Y5G3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGB1Q9Y5G3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGB1Q9Y5G3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGB1Q9Y5G3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGB1Q9Y5G3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGB1Q9Y5G3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGB1Q9Y5G3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGB1Q9Y5G3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGB1Q9Y5G3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGB1Q9Y5G3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHGB1Q9Y5G3 AL024507.2-201ENST00000606070 2574 ntBASIC21.04■□□□□ 0.96
PCDHGB1Q9Y5G3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGB1Q9Y5G3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
PCDHGB1Q9Y5G3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGB1Q9Y5G3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDHGB1Q9Y5G3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PCDHGB1Q9Y5G3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDHGB1Q9Y5G3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGB1Q9Y5G3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
PCDHGB1Q9Y5G3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
PCDHGB1Q9Y5G3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGB1Q9Y5G3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.03■□□□□ 0.96
PCDHGB1Q9Y5G3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PCDHGB1Q9Y5G3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGB1Q9Y5G3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGB1Q9Y5G3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PCDHGB1Q9Y5G3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGB1Q9Y5G3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDHGB1Q9Y5G3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGB1Q9Y5G3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGB1Q9Y5G3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGB1Q9Y5G3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHGB1Q9Y5G3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGB1Q9Y5G3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PCDHGB1Q9Y5G3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHGB1Q9Y5G3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGB1Q9Y5G3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGB1Q9Y5G3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHGB1Q9Y5G3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGB1Q9Y5G3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGB1Q9Y5G3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PCDHGB1Q9Y5G3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGB1Q9Y5G3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGB1Q9Y5G3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGB1Q9Y5G3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHGB1Q9Y5G3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGB1Q9Y5G3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21■□□□□ 0.95
PCDHGB1Q9Y5G3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHGB1Q9Y5G3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGB1Q9Y5G3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21■□□□□ 0.95
PCDHGB1Q9Y5G3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGB1Q9Y5G3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms