Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHB7Q9Y5E2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHB7Q9Y5E2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.07■■□□□ 1.6
PCDHB7Q9Y5E2 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.06■■□□□ 1.6
PCDHB7Q9Y5E2 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.06■■□□□ 1.6
PCDHB7Q9Y5E2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHB7Q9Y5E2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
PCDHB7Q9Y5E2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHB7Q9Y5E2 SUDS3P1-201ENST00000505831 966 ntBASIC25.06■■□□□ 1.6
PCDHB7Q9Y5E2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.06■■□□□ 1.6
PCDHB7Q9Y5E2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHB7Q9Y5E2 AL031432.3-201ENST00000607698 485 ntBASIC25.06■■□□□ 1.6
PCDHB7Q9Y5E2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
PCDHB7Q9Y5E2 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHB7Q9Y5E2 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHB7Q9Y5E2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.06■■□□□ 1.6
PCDHB7Q9Y5E2 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHB7Q9Y5E2 AL121749.1-202ENST00000609313 2153 ntBASIC25.05■■□□□ 1.6
PCDHB7Q9Y5E2 EDA-201ENST00000338901 1233 ntBASIC25.05■■□□□ 1.6
PCDHB7Q9Y5E2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHB7Q9Y5E2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHB7Q9Y5E2 AL355001.2-201ENST00000620617 1191 ntBASIC25.05■■□□□ 1.6
PCDHB7Q9Y5E2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHB7Q9Y5E2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHB7Q9Y5E2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHB7Q9Y5E2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHB7Q9Y5E2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHB7Q9Y5E2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
PCDHB7Q9Y5E2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHB7Q9Y5E2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.04■■□□□ 1.6
PCDHB7Q9Y5E2 DUX4L19-201ENST00000557448 1267 ntBASIC25.04■■□□□ 1.6
PCDHB7Q9Y5E2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHB7Q9Y5E2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.04■■□□□ 1.6
PCDHB7Q9Y5E2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHB7Q9Y5E2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHB7Q9Y5E2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHB7Q9Y5E2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.03■■□□□ 1.6
PCDHB7Q9Y5E2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHB7Q9Y5E2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHB7Q9Y5E2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHB7Q9Y5E2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHB7Q9Y5E2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.03■■□□□ 1.6
PCDHB7Q9Y5E2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.03■■□□□ 1.6
PCDHB7Q9Y5E2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHB7Q9Y5E2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
PCDHB7Q9Y5E2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.03■■□□□ 1.6
PCDHB7Q9Y5E2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
PCDHB7Q9Y5E2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHB7Q9Y5E2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHB7Q9Y5E2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
PCDHB7Q9Y5E2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHB7Q9Y5E2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.02■■□□□ 1.6
PCDHB7Q9Y5E2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHB7Q9Y5E2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHB7Q9Y5E2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHB7Q9Y5E2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.01■■□□□ 1.59
PCDHB7Q9Y5E2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
PCDHB7Q9Y5E2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
PCDHB7Q9Y5E2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHB7Q9Y5E2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHB7Q9Y5E2 AC131274.2-201ENST00000580697 1507 ntBASIC25.01■■□□□ 1.59
PCDHB7Q9Y5E2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHB7Q9Y5E2 SLC6A10P-202ENST00000431994 2058 ntBASIC25■■□□□ 1.59
PCDHB7Q9Y5E2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHB7Q9Y5E2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHB7Q9Y5E2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
PCDHB7Q9Y5E2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25■■□□□ 1.59
PCDHB7Q9Y5E2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHB7Q9Y5E2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC24.99■■□□□ 1.59
PCDHB7Q9Y5E2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHB7Q9Y5E2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC24.99■■□□□ 1.59
PCDHB7Q9Y5E2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.99■■□□□ 1.59
PCDHB7Q9Y5E2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHB7Q9Y5E2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC24.99■■□□□ 1.59
PCDHB7Q9Y5E2 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
PCDHB7Q9Y5E2 AC092171.4-201ENST00000609130 632 ntBASIC24.99■■□□□ 1.59
PCDHB7Q9Y5E2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHB7Q9Y5E2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHB7Q9Y5E2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.98■■□□□ 1.59
PCDHB7Q9Y5E2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHB7Q9Y5E2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHB7Q9Y5E2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHB7Q9Y5E2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHB7Q9Y5E2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC24.98■■□□□ 1.59
PCDHB7Q9Y5E2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.98■■□□□ 1.59
PCDHB7Q9Y5E2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHB7Q9Y5E2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
PCDHB7Q9Y5E2 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHB7Q9Y5E2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHB7Q9Y5E2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.97■■□□□ 1.59
PCDHB7Q9Y5E2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC24.97■■□□□ 1.59
PCDHB7Q9Y5E2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC24.97■■□□□ 1.59
PCDHB7Q9Y5E2 SF1-220ENST00000626028 704 ntTSL 2 BASIC24.97■■□□□ 1.59
PCDHB7Q9Y5E2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.97■■□□□ 1.59
PCDHB7Q9Y5E2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHB7Q9Y5E2 SYT6-210ENST00000641643 1587 ntBASIC24.97■■□□□ 1.59
PCDHB7Q9Y5E2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
PCDHB7Q9Y5E2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHB7Q9Y5E2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.96■■□□□ 1.59
PCDHB7Q9Y5E2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms