Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC29.55■■■□□ 2.32
RTCBQ9Y3I0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
RTCBQ9Y3I0 AC099791.2-201ENST00000605725 427 ntBASIC29.54■■■□□ 2.32
RTCBQ9Y3I0 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
RTCBQ9Y3I0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC29.53■■■□□ 2.32
RTCBQ9Y3I0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC29.53■■■□□ 2.32
RTCBQ9Y3I0 PTCHD3P2-201ENST00000424937 1205 ntBASIC29.53■■■□□ 2.32
RTCBQ9Y3I0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC29.53■■■□□ 2.32
RTCBQ9Y3I0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC29.53■■■□□ 2.32
RTCBQ9Y3I0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
RTCBQ9Y3I0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC29.53■■■□□ 2.32
RTCBQ9Y3I0 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
RTCBQ9Y3I0 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.52■■■□□ 2.32
RTCBQ9Y3I0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
RTCBQ9Y3I0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC29.52■■■□□ 2.32
RTCBQ9Y3I0 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RTCBQ9Y3I0 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
RTCBQ9Y3I0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RTCBQ9Y3I0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RTCBQ9Y3I0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC29.52■■■□□ 2.32
RTCBQ9Y3I0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RTCBQ9Y3I0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
RTCBQ9Y3I0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC29.52■■■□□ 2.32
RTCBQ9Y3I0 ERN1-208ENST00000606895 2068 ntBASIC29.52■■■□□ 2.32
RTCBQ9Y3I0 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC29.51■■■□□ 2.32
RTCBQ9Y3I0 IRS3P-201ENST00000223076 1006 ntBASIC29.51■■■□□ 2.31
RTCBQ9Y3I0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RTCBQ9Y3I0 AC008764.7-201ENST00000593779 1081 ntBASIC29.51■■■□□ 2.31
RTCBQ9Y3I0 AC011298.3-201ENST00000615796 283 ntBASIC29.51■■■□□ 2.31
RTCBQ9Y3I0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RTCBQ9Y3I0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
RTCBQ9Y3I0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
RTCBQ9Y3I0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC29.5■■■□□ 2.31
RTCBQ9Y3I0 AL138724.1-201ENST00000606771 1088 ntBASIC29.5■■■□□ 2.31
RTCBQ9Y3I0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC29.5■■■□□ 2.31
RTCBQ9Y3I0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC29.5■■■□□ 2.31
RTCBQ9Y3I0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
RTCBQ9Y3I0 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC29.5■■■□□ 2.31
RTCBQ9Y3I0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC29.5■■■□□ 2.31
RTCBQ9Y3I0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.5■■■□□ 2.31
RTCBQ9Y3I0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
RTCBQ9Y3I0 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
RTCBQ9Y3I0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC29.49■■■□□ 2.31
RTCBQ9Y3I0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC29.49■■■□□ 2.31
RTCBQ9Y3I0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC29.49■■■□□ 2.31
RTCBQ9Y3I0 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
RTCBQ9Y3I0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
RTCBQ9Y3I0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
RTCBQ9Y3I0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RTCBQ9Y3I0 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RTCBQ9Y3I0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RTCBQ9Y3I0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
RTCBQ9Y3I0 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
RTCBQ9Y3I0 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC29.48■■■□□ 2.31
RTCBQ9Y3I0 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
RTCBQ9Y3I0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
RTCBQ9Y3I0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC29.47■■■□□ 2.31
RTCBQ9Y3I0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC29.47■■■□□ 2.31
RTCBQ9Y3I0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
RTCBQ9Y3I0 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC29.47■■■□□ 2.31
RTCBQ9Y3I0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC29.46■■■□□ 2.31
RTCBQ9Y3I0 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
RTCBQ9Y3I0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
RTCBQ9Y3I0 AC099791.1-201ENST00000416440 715 ntBASIC29.46■■■□□ 2.31
RTCBQ9Y3I0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC29.46■■■□□ 2.31
RTCBQ9Y3I0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
RTCBQ9Y3I0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC29.46■■■□□ 2.31
RTCBQ9Y3I0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC29.46■■■□□ 2.31
RTCBQ9Y3I0 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC29.46■■■□□ 2.31
RTCBQ9Y3I0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.31
RTCBQ9Y3I0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC29.45■■■□□ 2.31
RTCBQ9Y3I0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
RTCBQ9Y3I0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC29.45■■■□□ 2.31
RTCBQ9Y3I0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
RTCBQ9Y3I0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC29.45■■■□□ 2.31
RTCBQ9Y3I0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC29.45■■■□□ 2.3
RTCBQ9Y3I0 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
RTCBQ9Y3I0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
RTCBQ9Y3I0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
RTCBQ9Y3I0 JTB-203ENST00000368589 1216 ntTSL 2 BASIC29.44■■■□□ 2.3
RTCBQ9Y3I0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC29.44■■■□□ 2.3
RTCBQ9Y3I0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC29.44■■■□□ 2.3
RTCBQ9Y3I0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC29.44■■■□□ 2.3
RTCBQ9Y3I0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC29.44■■■□□ 2.3
RTCBQ9Y3I0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RTCBQ9Y3I0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC29.43■■■□□ 2.3
RTCBQ9Y3I0 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
RTCBQ9Y3I0 AC131274.2-201ENST00000580697 1507 ntBASIC29.42■■■□□ 2.3
RTCBQ9Y3I0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC29.42■■■□□ 2.3
RTCBQ9Y3I0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC29.42■■■□□ 2.3
RTCBQ9Y3I0 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC29.42■■■□□ 2.3
RTCBQ9Y3I0 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
RTCBQ9Y3I0 AC009102.2-201ENST00000606772 1639 ntBASIC29.41■■■□□ 2.3
RTCBQ9Y3I0 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
RTCBQ9Y3I0 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
RTCBQ9Y3I0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC29.4■■■□□ 2.3
RTCBQ9Y3I0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
RTCBQ9Y3I0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
RTCBQ9Y3I0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RTCBQ9Y3I0 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC29.39■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms