Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
SPHK1Q9NYA1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SPHK1Q9NYA1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.33■■□□□ 1.17
SPHK1Q9NYA1 AL356441.2-201ENST00000443009 864 ntBASIC22.33■■□□□ 1.17
SPHK1Q9NYA1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.33■■□□□ 1.17
SPHK1Q9NYA1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.33■■□□□ 1.17
SPHK1Q9NYA1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.33■■□□□ 1.17
SPHK1Q9NYA1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.33■■□□□ 1.17
SPHK1Q9NYA1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SPHK1Q9NYA1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SPHK1Q9NYA1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
SPHK1Q9NYA1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SPHK1Q9NYA1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
SPHK1Q9NYA1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
SPHK1Q9NYA1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.32■■□□□ 1.16
SPHK1Q9NYA1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.32■■□□□ 1.16
SPHK1Q9NYA1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.32■■□□□ 1.16
SPHK1Q9NYA1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.32■■□□□ 1.16
SPHK1Q9NYA1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
SPHK1Q9NYA1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.32■■□□□ 1.16
SPHK1Q9NYA1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SPHK1Q9NYA1 AC131274.2-201ENST00000580697 1507 ntBASIC22.31■■□□□ 1.16
SPHK1Q9NYA1 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SPHK1Q9NYA1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SPHK1Q9NYA1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SPHK1Q9NYA1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SPHK1Q9NYA1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.31■■□□□ 1.16
SPHK1Q9NYA1 SNX5-217ENST00000606557 1087 ntBASIC22.31■■□□□ 1.16
SPHK1Q9NYA1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SPHK1Q9NYA1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.31■■□□□ 1.16
SPHK1Q9NYA1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SPHK1Q9NYA1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
SPHK1Q9NYA1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
SPHK1Q9NYA1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SPHK1Q9NYA1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SPHK1Q9NYA1 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.3■■□□□ 1.16
SPHK1Q9NYA1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SPHK1Q9NYA1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.3■■□□□ 1.16
SPHK1Q9NYA1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SPHK1Q9NYA1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.29■■□□□ 1.16
SPHK1Q9NYA1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
SPHK1Q9NYA1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SPHK1Q9NYA1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.29■■□□□ 1.16
SPHK1Q9NYA1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SPHK1Q9NYA1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
SPHK1Q9NYA1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.29■■□□□ 1.16
SPHK1Q9NYA1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SPHK1Q9NYA1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SPHK1Q9NYA1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.28■■□□□ 1.16
SPHK1Q9NYA1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.28■■□□□ 1.16
SPHK1Q9NYA1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SPHK1Q9NYA1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SPHK1Q9NYA1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SPHK1Q9NYA1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.28■■□□□ 1.16
SPHK1Q9NYA1 KRT16P3-201ENST00000439127 1283 ntBASIC22.28■■□□□ 1.16
SPHK1Q9NYA1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
SPHK1Q9NYA1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.28■■□□□ 1.16
SPHK1Q9NYA1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.28■■□□□ 1.16
SPHK1Q9NYA1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
SPHK1Q9NYA1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.28■■□□□ 1.16
SPHK1Q9NYA1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SPHK1Q9NYA1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.28■■□□□ 1.16
SPHK1Q9NYA1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SPHK1Q9NYA1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SPHK1Q9NYA1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
SPHK1Q9NYA1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
SPHK1Q9NYA1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SPHK1Q9NYA1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.27■■□□□ 1.16
SPHK1Q9NYA1 AC010997.5-201ENST00000609182 354 ntBASIC22.27■■□□□ 1.16
SPHK1Q9NYA1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.27■■□□□ 1.16
SPHK1Q9NYA1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SPHK1Q9NYA1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SPHK1Q9NYA1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SPHK1Q9NYA1 AC004448.1-201ENST00000458332 883 ntBASIC22.26■■□□□ 1.15
SPHK1Q9NYA1 MTDHP2-201ENST00000601468 714 ntBASIC22.26■■□□□ 1.15
SPHK1Q9NYA1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
SPHK1Q9NYA1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.26■■□□□ 1.15
SPHK1Q9NYA1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SPHK1Q9NYA1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.25■■□□□ 1.15
SPHK1Q9NYA1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.25■■□□□ 1.15
SPHK1Q9NYA1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SPHK1Q9NYA1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPHK1Q9NYA1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
SPHK1Q9NYA1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPHK1Q9NYA1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.25■■□□□ 1.15
SPHK1Q9NYA1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
SPHK1Q9NYA1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
SPHK1Q9NYA1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.25■■□□□ 1.15
SPHK1Q9NYA1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPHK1Q9NYA1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SPHK1Q9NYA1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPHK1Q9NYA1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPHK1Q9NYA1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.24■■□□□ 1.15
SPHK1Q9NYA1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
SPHK1Q9NYA1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
SPHK1Q9NYA1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPHK1Q9NYA1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SPHK1Q9NYA1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPHK1Q9NYA1 AL022069.1-201ENST00000568025 1636 ntBASIC22.24■■□□□ 1.15
SPHK1Q9NYA1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms