Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9N2K0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9N2K0 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q9N2K0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Q9N2K0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.31■□□□□ 0.68
Q9N2K0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.31■□□□□ 0.68
Q9N2K0 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Q9N2K0 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Q9N2K0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
Q9N2K0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.31■□□□□ 0.68
Q9N2K0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q9N2K0 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.31■□□□□ 0.68
Q9N2K0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.31■□□□□ 0.68
Q9N2K0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Q9N2K0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Q9N2K0 RNF126P1-201ENST00000567452 1320 ntBASIC19.3■□□□□ 0.68
Q9N2K0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Q9N2K0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Q9N2K0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q9N2K0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.3■□□□□ 0.68
Q9N2K0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q9N2K0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Q9N2K0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q9N2K0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Q9N2K0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Q9N2K0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.29■□□□□ 0.68
Q9N2K0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.29■□□□□ 0.68
Q9N2K0 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Q9N2K0 AC018755.3-202ENST00000596210 929 ntBASIC19.29■□□□□ 0.68
Q9N2K0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Q9N2K0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Q9N2K0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.28■□□□□ 0.68
Q9N2K0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.28■□□□□ 0.68
Q9N2K0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.28■□□□□ 0.68
Q9N2K0 AC090877.2-201ENST00000558441 1738 ntBASIC19.28■□□□□ 0.68
Q9N2K0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q9N2K0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Q9N2K0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q9N2K0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.28■□□□□ 0.68
Q9N2K0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Q9N2K0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q9N2K0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q9N2K0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q9N2K0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Q9N2K0 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.28■□□□□ 0.68
Q9N2K0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q9N2K0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Q9N2K0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q9N2K0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q9N2K0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q9N2K0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q9N2K0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Q9N2K0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.27■□□□□ 0.68
Q9N2K0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q9N2K0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Q9N2K0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q9N2K0 AL592293.1-201ENST00000502889 1188 ntBASIC19.27■□□□□ 0.68
Q9N2K0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.27■□□□□ 0.68
Q9N2K0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.27■□□□□ 0.68
Q9N2K0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q9N2K0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q9N2K0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Q9N2K0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Q9N2K0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q9N2K0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q9N2K0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.26■□□□□ 0.67
Q9N2K0 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Q9N2K0 SPCS2P3-201ENST00000500401 656 ntBASIC19.26■□□□□ 0.67
Q9N2K0 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.26■□□□□ 0.67
Q9N2K0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Q9N2K0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q9N2K0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q9N2K0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q9N2K0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.25■□□□□ 0.67
Q9N2K0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q9N2K0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q9N2K0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.25■□□□□ 0.67
Q9N2K0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Q9N2K0 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q9N2K0 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Q9N2K0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Q9N2K0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.25■□□□□ 0.67
Q9N2K0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Q9N2K0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Q9N2K0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.24■□□□□ 0.67
Q9N2K0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q9N2K0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Q9N2K0 AL592295.1-201ENST00000400984 884 ntBASIC19.24■□□□□ 0.67
Q9N2K0 AC087393.1-201ENST00000582896 145 ntBASIC19.24■□□□□ 0.67
Q9N2K0 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Q9N2K0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Q9N2K0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
Q9N2K0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Q9N2K0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Q9N2K0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.23■□□□□ 0.67
Q9N2K0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Q9N2K0 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Q9N2K0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.23■□□□□ 0.67
Q9N2K0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.23■□□□□ 0.67
Q9N2K0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms