Protein–RNA interactions for Protein: Q9H741

C12orf49, UPF0454 protein C12orf49, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49Q9H741 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C12orf49Q9H741 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
C12orf49Q9H741 AC020928.2-201ENST00000588717 2197 ntBASIC20.52■□□□□ 0.88
C12orf49Q9H741 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
C12orf49Q9H741 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
C12orf49Q9H741 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
C12orf49Q9H741 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C12orf49Q9H741 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.51■□□□□ 0.87
C12orf49Q9H741 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C12orf49Q9H741 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
C12orf49Q9H741 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.51■□□□□ 0.87
C12orf49Q9H741 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
C12orf49Q9H741 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.51■□□□□ 0.87
C12orf49Q9H741 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
C12orf49Q9H741 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C12orf49Q9H741 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.5■□□□□ 0.87
C12orf49Q9H741 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
C12orf49Q9H741 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
C12orf49Q9H741 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
C12orf49Q9H741 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
C12orf49Q9H741 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.5■□□□□ 0.87
C12orf49Q9H741 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
C12orf49Q9H741 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.5■□□□□ 0.87
C12orf49Q9H741 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
C12orf49Q9H741 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
C12orf49Q9H741 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.5■□□□□ 0.87
C12orf49Q9H741 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
C12orf49Q9H741 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C12orf49Q9H741 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
C12orf49Q9H741 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.49■□□□□ 0.87
C12orf49Q9H741 SNX5-217ENST00000606557 1087 ntBASIC20.49■□□□□ 0.87
C12orf49Q9H741 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
C12orf49Q9H741 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
C12orf49Q9H741 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
C12orf49Q9H741 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
C12orf49Q9H741 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.48■□□□□ 0.87
C12orf49Q9H741 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.48■□□□□ 0.87
C12orf49Q9H741 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.48■□□□□ 0.87
C12orf49Q9H741 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.48■□□□□ 0.87
C12orf49Q9H741 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
C12orf49Q9H741 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
C12orf49Q9H741 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
C12orf49Q9H741 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
C12orf49Q9H741 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
C12orf49Q9H741 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
C12orf49Q9H741 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
C12orf49Q9H741 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.47■□□□□ 0.87
C12orf49Q9H741 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
C12orf49Q9H741 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.46■□□□□ 0.87
C12orf49Q9H741 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
C12orf49Q9H741 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
C12orf49Q9H741 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
C12orf49Q9H741 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
C12orf49Q9H741 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.46■□□□□ 0.87
C12orf49Q9H741 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
C12orf49Q9H741 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.46■□□□□ 0.87
C12orf49Q9H741 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
C12orf49Q9H741 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
C12orf49Q9H741 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
C12orf49Q9H741 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
C12orf49Q9H741 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
C12orf49Q9H741 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
C12orf49Q9H741 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
C12orf49Q9H741 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
C12orf49Q9H741 HLA-L-211ENST00000482052 1765 ntBASIC20.45■□□□□ 0.86
C12orf49Q9H741 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
C12orf49Q9H741 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
C12orf49Q9H741 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.45■□□□□ 0.86
C12orf49Q9H741 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
C12orf49Q9H741 AC138932.3-201ENST00000567634 1902 ntBASIC20.45■□□□□ 0.86
C12orf49Q9H741 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.45■□□□□ 0.86
C12orf49Q9H741 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.45■□□□□ 0.86
C12orf49Q9H741 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.44■□□□□ 0.86
C12orf49Q9H741 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.44■□□□□ 0.86
C12orf49Q9H741 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.44■□□□□ 0.86
C12orf49Q9H741 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
C12orf49Q9H741 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.44■□□□□ 0.86
C12orf49Q9H741 MIR6724-1-201ENST00000616420 92 ntBASIC20.44■□□□□ 0.86
C12orf49Q9H741 MIR6724-2-201ENST00000616483 92 ntBASIC20.44■□□□□ 0.86
C12orf49Q9H741 MIR6724-4-201ENST00000617390 92 ntBASIC20.44■□□□□ 0.86
C12orf49Q9H741 MIR6724-3-201ENST00000622482 92 ntBASIC20.44■□□□□ 0.86
C12orf49Q9H741 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
C12orf49Q9H741 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
C12orf49Q9H741 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
C12orf49Q9H741 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.43■□□□□ 0.86
C12orf49Q9H741 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
C12orf49Q9H741 AC142381.3-201ENST00000568208 1670 ntBASIC20.43■□□□□ 0.86
C12orf49Q9H741 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.43■□□□□ 0.86
C12orf49Q9H741 AC131274.2-201ENST00000580697 1507 ntBASIC20.43■□□□□ 0.86
C12orf49Q9H741 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.42■□□□□ 0.86
C12orf49Q9H741 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
C12orf49Q9H741 AC135731.1-201ENST00000569415 2548 ntBASIC20.42■□□□□ 0.86
C12orf49Q9H741 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
C12orf49Q9H741 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
C12orf49Q9H741 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.42■□□□□ 0.86
C12orf49Q9H741 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
C12orf49Q9H741 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
C12orf49Q9H741 AP003733.4-201ENST00000623785 1697 ntBASIC20.42■□□□□ 0.86
C12orf49Q9H741 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
C12orf49Q9H741 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms