Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
KRTAP3-3Q9BYR6 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC14.03□□□□□ -0.16
KRTAP3-3Q9BYR6 RNU5A-4P-201ENST00000516588 111 ntBASIC14.03□□□□□ -0.16
KRTAP3-3Q9BYR6 ELOC-208ENST00000523815 719 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
KRTAP3-3Q9BYR6 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC14.03□□□□□ -0.16
KRTAP3-3Q9BYR6 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KRTAP3-3Q9BYR6 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC14.03□□□□□ -0.16
KRTAP3-3Q9BYR6 AC090568.2-206ENST00000521936 1469 ntTSL 3 BASIC14.03□□□□□ -0.16
KRTAP3-3Q9BYR6 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KRTAP3-3Q9BYR6 AC012321.1-201ENST00000561622 1588 ntBASIC14.03□□□□□ -0.16
KRTAP3-3Q9BYR6 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC14.03□□□□□ -0.16
KRTAP3-3Q9BYR6 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
KRTAP3-3Q9BYR6 SPRR3-202ENST00000331860 985 ntAPPRIS P2 TSL 3 BASIC14.02□□□□□ -0.17
KRTAP3-3Q9BYR6 AC003075.1-208ENST00000415246 596 ntTSL 3 BASIC14.02□□□□□ -0.17
KRTAP3-3Q9BYR6 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
KRTAP3-3Q9BYR6 AC092810.1-201ENST00000429208 1224 ntBASIC14.02□□□□□ -0.17
KRTAP3-3Q9BYR6 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KRTAP3-3Q9BYR6 KIZ-AS1-202ENST00000443753 1161 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
KRTAP3-3Q9BYR6 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC14.02□□□□□ -0.17
KRTAP3-3Q9BYR6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.02□□□□□ -0.17
KRTAP3-3Q9BYR6 AL592293.1-201ENST00000502889 1188 ntBASIC14.02□□□□□ -0.17
KRTAP3-3Q9BYR6 AL133330.1-201ENST00000510619 704 ntTSL 5 BASIC14.02□□□□□ -0.17
KRTAP3-3Q9BYR6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.02□□□□□ -0.17
KRTAP3-3Q9BYR6 HNRNPA1P5-201ENST00000558213 966 ntBASIC14.02□□□□□ -0.17
KRTAP3-3Q9BYR6 AC015910.1-202ENST00000580264 633 ntTSL 5 BASIC14.02□□□□□ -0.17
KRTAP3-3Q9BYR6 AC015878.2-201ENST00000584331 361 ntTSL 5 BASIC14.02□□□□□ -0.17
KRTAP3-3Q9BYR6 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC14.02□□□□□ -0.17
KRTAP3-3Q9BYR6 AL096803.3-201ENST00000609032 532 ntBASIC14.02□□□□□ -0.17
KRTAP3-3Q9BYR6 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
KRTAP3-3Q9BYR6 LMO3-224ENST00000540848 1574 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
KRTAP3-3Q9BYR6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KRTAP3-3Q9BYR6 AL358781.1-202ENST00000321081 1360 ntBASIC14.01□□□□□ -0.17
KRTAP3-3Q9BYR6 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KRTAP3-3Q9BYR6 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
KRTAP3-3Q9BYR6 RNU4-86P-201ENST00000410135 219 ntBASIC14.01□□□□□ -0.17
KRTAP3-3Q9BYR6 GTF2IP5-201ENST00000414608 731 ntBASIC14.01□□□□□ -0.17
KRTAP3-3Q9BYR6 PTCD2P2-201ENST00000415579 1095 ntBASIC14.01□□□□□ -0.17
KRTAP3-3Q9BYR6 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC14.01□□□□□ -0.17
KRTAP3-3Q9BYR6 MTCO2P17-201ENST00000424336 677 ntBASIC14.01□□□□□ -0.17
KRTAP3-3Q9BYR6 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC14.01□□□□□ -0.17
KRTAP3-3Q9BYR6 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC14.01□□□□□ -0.17
KRTAP3-3Q9BYR6 ZRANB2-AS2-205ENST00000455406 783 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
KRTAP3-3Q9BYR6 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
KRTAP3-3Q9BYR6 AC112191.1-201ENST00000523689 701 ntBASIC14.01□□□□□ -0.17
KRTAP3-3Q9BYR6 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC14.01□□□□□ -0.17
KRTAP3-3Q9BYR6 AC131934.1-201ENST00000527799 912 ntTSL 5 BASIC14.01□□□□□ -0.17
KRTAP3-3Q9BYR6 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC14.01□□□□□ -0.17
KRTAP3-3Q9BYR6 Z99129.2-201ENST00000619967 314 ntBASIC14.01□□□□□ -0.17
KRTAP3-3Q9BYR6 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KRTAP3-3Q9BYR6 FGF13-205ENST00000441825 1625 ntTSL 5 BASIC14.01□□□□□ -0.17
KRTAP3-3Q9BYR6 AP001002.1-201ENST00000625148 1513 ntBASIC14□□□□□ -0.17
KRTAP3-3Q9BYR6 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
KRTAP3-3Q9BYR6 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC14□□□□□ -0.17
KRTAP3-3Q9BYR6 RNU6-1176P-201ENST00000390955 107 ntBASIC14□□□□□ -0.17
KRTAP3-3Q9BYR6 BOLA3P3-201ENST00000505182 232 ntBASIC14□□□□□ -0.17
KRTAP3-3Q9BYR6 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC14□□□□□ -0.17
KRTAP3-3Q9BYR6 AC069208.1-206ENST00000538905 832 ntTSL 4 BASIC14□□□□□ -0.17
KRTAP3-3Q9BYR6 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
KRTAP3-3Q9BYR6 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC14□□□□□ -0.17
KRTAP3-3Q9BYR6 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14□□□□□ -0.17
KRTAP3-3Q9BYR6 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC14□□□□□ -0.17
KRTAP3-3Q9BYR6 LIPC-204ENST00000433326 1484 ntTSL 2 BASIC13.99□□□□□ -0.17
KRTAP3-3Q9BYR6 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
KRTAP3-3Q9BYR6 RBM5-AS1-201ENST00000630404 1386 ntBASIC13.99□□□□□ -0.17
KRTAP3-3Q9BYR6 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KRTAP3-3Q9BYR6 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
KRTAP3-3Q9BYR6 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC13.99□□□□□ -0.17
KRTAP3-3Q9BYR6 SEPT14P1-201ENST00000458703 648 ntBASIC13.99□□□□□ -0.17
KRTAP3-3Q9BYR6 AC096751.2-201ENST00000507483 792 ntTSL 3 BASIC13.99□□□□□ -0.17
KRTAP3-3Q9BYR6 AC008592.3-201ENST00000514941 418 ntBASIC13.99□□□□□ -0.17
KRTAP3-3Q9BYR6 RNU6-751P-201ENST00000516382 101 ntBASIC13.99□□□□□ -0.17
KRTAP3-3Q9BYR6 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC13.99□□□□□ -0.17
KRTAP3-3Q9BYR6 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC13.99□□□□□ -0.17
KRTAP3-3Q9BYR6 AC115102.1-201ENST00000558044 487 ntTSL 5 BASIC13.99□□□□□ -0.17
KRTAP3-3Q9BYR6 IGFL2-AS1-203ENST00000598518 1037 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
KRTAP3-3Q9BYR6 AC006946.3-201ENST00000609791 756 ntBASIC13.99□□□□□ -0.17
KRTAP3-3Q9BYR6 AC009093.7-201ENST00000623853 1223 ntBASIC13.99□□□□□ -0.17
KRTAP3-3Q9BYR6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
KRTAP3-3Q9BYR6 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC13.99□□□□□ -0.17
KRTAP3-3Q9BYR6 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
KRTAP3-3Q9BYR6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRTAP3-3Q9BYR6 INO80B-203ENST00000409917 796 ntTSL 2 BASIC13.98□□□□□ -0.17
KRTAP3-3Q9BYR6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRTAP3-3Q9BYR6 LINC02262-201ENST00000416680 735 ntTSL 3 BASIC13.98□□□□□ -0.17
KRTAP3-3Q9BYR6 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC13.98□□□□□ -0.17
KRTAP3-3Q9BYR6 USP9YP10-201ENST00000454868 628 ntBASIC13.98□□□□□ -0.17
KRTAP3-3Q9BYR6 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC13.98□□□□□ -0.17
KRTAP3-3Q9BYR6 AC008770.1-204ENST00000489336 622 ntTSL 2 BASIC13.98□□□□□ -0.17
KRTAP3-3Q9BYR6 USP9YP5-201ENST00000511770 630 ntBASIC13.98□□□□□ -0.17
KRTAP3-3Q9BYR6 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC13.98□□□□□ -0.17
KRTAP3-3Q9BYR6 AL109659.3-201ENST00000624985 950 ntBASIC13.98□□□□□ -0.17
KRTAP3-3Q9BYR6 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KRTAP3-3Q9BYR6 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRTAP3-3Q9BYR6 AL606490.5-201ENST00000413071 760 ntBASIC13.97□□□□□ -0.17
KRTAP3-3Q9BYR6 AC234781.2-201ENST00000426370 994 ntBASIC13.97□□□□□ -0.17
KRTAP3-3Q9BYR6 LINC00992-201ENST00000504107 617 ntTSL 2 BASIC13.97□□□□□ -0.17
KRTAP3-3Q9BYR6 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KRTAP3-3Q9BYR6 RNU6-467P-201ENST00000517027 110 ntBASIC13.97□□□□□ -0.17
KRTAP3-3Q9BYR6 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC13.97□□□□□ -0.17
KRTAP3-3Q9BYR6 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms