Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SSBP3Q9BWW4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SSBP3Q9BWW4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SSBP3Q9BWW4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSBP3Q9BWW4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SSBP3Q9BWW4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSBP3Q9BWW4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SSBP3Q9BWW4 SNX5-217ENST00000606557 1087 ntBASIC19.21■□□□□ 0.67
SSBP3Q9BWW4 MIR6724-1-201ENST00000616420 92 ntBASIC19.21■□□□□ 0.67
SSBP3Q9BWW4 MIR6724-2-201ENST00000616483 92 ntBASIC19.21■□□□□ 0.67
SSBP3Q9BWW4 MIR6724-4-201ENST00000617390 92 ntBASIC19.21■□□□□ 0.67
SSBP3Q9BWW4 MIR6724-3-201ENST00000622482 92 ntBASIC19.21■□□□□ 0.67
SSBP3Q9BWW4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.21■□□□□ 0.67
SSBP3Q9BWW4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.21■□□□□ 0.67
SSBP3Q9BWW4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSBP3Q9BWW4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.21■□□□□ 0.67
SSBP3Q9BWW4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSBP3Q9BWW4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSBP3Q9BWW4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SSBP3Q9BWW4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSBP3Q9BWW4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSBP3Q9BWW4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSBP3Q9BWW4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.2■□□□□ 0.66
SSBP3Q9BWW4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SSBP3Q9BWW4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.2■□□□□ 0.66
SSBP3Q9BWW4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSBP3Q9BWW4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSBP3Q9BWW4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SSBP3Q9BWW4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSBP3Q9BWW4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.19■□□□□ 0.66
SSBP3Q9BWW4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSBP3Q9BWW4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSBP3Q9BWW4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSBP3Q9BWW4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SSBP3Q9BWW4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SSBP3Q9BWW4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSBP3Q9BWW4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SSBP3Q9BWW4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.18■□□□□ 0.66
SSBP3Q9BWW4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSBP3Q9BWW4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.18■□□□□ 0.66
SSBP3Q9BWW4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSBP3Q9BWW4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.18■□□□□ 0.66
SSBP3Q9BWW4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSBP3Q9BWW4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSBP3Q9BWW4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.17■□□□□ 0.66
SSBP3Q9BWW4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.17■□□□□ 0.66
SSBP3Q9BWW4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.17■□□□□ 0.66
SSBP3Q9BWW4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
SSBP3Q9BWW4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.17■□□□□ 0.66
SSBP3Q9BWW4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSBP3Q9BWW4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
SSBP3Q9BWW4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.17■□□□□ 0.66
SSBP3Q9BWW4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.17■□□□□ 0.66
SSBP3Q9BWW4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSBP3Q9BWW4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SSBP3Q9BWW4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSBP3Q9BWW4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.16■□□□□ 0.66
SSBP3Q9BWW4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.16■□□□□ 0.66
SSBP3Q9BWW4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SSBP3Q9BWW4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSBP3Q9BWW4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSBP3Q9BWW4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSBP3Q9BWW4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SSBP3Q9BWW4 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.16■□□□□ 0.66
SSBP3Q9BWW4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.16■□□□□ 0.66
SSBP3Q9BWW4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SSBP3Q9BWW4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.16■□□□□ 0.66
SSBP3Q9BWW4 MIR6722-201ENST00000617286 78 ntBASIC19.16■□□□□ 0.66
SSBP3Q9BWW4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.16■□□□□ 0.66
SSBP3Q9BWW4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSBP3Q9BWW4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.16■□□□□ 0.66
SSBP3Q9BWW4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SSBP3Q9BWW4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SSBP3Q9BWW4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSBP3Q9BWW4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.15■□□□□ 0.66
SSBP3Q9BWW4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.15■□□□□ 0.66
SSBP3Q9BWW4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.15■□□□□ 0.66
SSBP3Q9BWW4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSBP3Q9BWW4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.15■□□□□ 0.66
SSBP3Q9BWW4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSBP3Q9BWW4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSBP3Q9BWW4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.15■□□□□ 0.66
SSBP3Q9BWW4 AC004448.1-201ENST00000458332 883 ntBASIC19.15■□□□□ 0.66
SSBP3Q9BWW4 AC008406.3-201ENST00000620001 1374 ntBASIC19.15■□□□□ 0.66
SSBP3Q9BWW4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.14■□□□□ 0.65
SSBP3Q9BWW4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SSBP3Q9BWW4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
SSBP3Q9BWW4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.14■□□□□ 0.65
SSBP3Q9BWW4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.14■□□□□ 0.65
SSBP3Q9BWW4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSBP3Q9BWW4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.14■□□□□ 0.65
SSBP3Q9BWW4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.14■□□□□ 0.65
SSBP3Q9BWW4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.14■□□□□ 0.65
SSBP3Q9BWW4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.14■□□□□ 0.65
SSBP3Q9BWW4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.14■□□□□ 0.65
SSBP3Q9BWW4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.14■□□□□ 0.65
SSBP3Q9BWW4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSBP3Q9BWW4 AL356740.2-201ENST00000601559 647 ntBASIC19.14■□□□□ 0.65
SSBP3Q9BWW4 AL117332.1-201ENST00000622628 974 ntBASIC19.14■□□□□ 0.65
SSBP3Q9BWW4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms