Protein–RNA interactions for Protein: Q96TC7

RMDN3, Regulator of microtubule dynamics protein 3, humanhuman

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3Q96TC7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.34■■□□□ 1.81
RMDN3Q96TC7 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.34■■□□□ 1.81
RMDN3Q96TC7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.34■■□□□ 1.81
RMDN3Q96TC7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
RMDN3Q96TC7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RMDN3Q96TC7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RMDN3Q96TC7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RMDN3Q96TC7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.33■■□□□ 1.81
RMDN3Q96TC7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
RMDN3Q96TC7 AC131274.2-201ENST00000580697 1507 ntBASIC26.33■■□□□ 1.81
RMDN3Q96TC7 AC019069.1-201ENST00000610008 1333 ntBASIC26.33■■□□□ 1.81
RMDN3Q96TC7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.8
RMDN3Q96TC7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RMDN3Q96TC7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
RMDN3Q96TC7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RMDN3Q96TC7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RMDN3Q96TC7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RMDN3Q96TC7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
RMDN3Q96TC7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.32■■□□□ 1.8
RMDN3Q96TC7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.32■■□□□ 1.8
RMDN3Q96TC7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
RMDN3Q96TC7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RMDN3Q96TC7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RMDN3Q96TC7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
RMDN3Q96TC7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RMDN3Q96TC7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RMDN3Q96TC7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
RMDN3Q96TC7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RMDN3Q96TC7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RMDN3Q96TC7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RMDN3Q96TC7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
RMDN3Q96TC7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.3■■□□□ 1.8
RMDN3Q96TC7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.3■■□□□ 1.8
RMDN3Q96TC7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
RMDN3Q96TC7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RMDN3Q96TC7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RMDN3Q96TC7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
RMDN3Q96TC7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RMDN3Q96TC7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
RMDN3Q96TC7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC26.29■■□□□ 1.8
RMDN3Q96TC7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.28■■□□□ 1.8
RMDN3Q96TC7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC26.28■■□□□ 1.8
RMDN3Q96TC7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RMDN3Q96TC7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.28■■□□□ 1.8
RMDN3Q96TC7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RMDN3Q96TC7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RMDN3Q96TC7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
RMDN3Q96TC7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
RMDN3Q96TC7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RMDN3Q96TC7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.27■■□□□ 1.8
RMDN3Q96TC7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.27■■□□□ 1.8
RMDN3Q96TC7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.27■■□□□ 1.8
RMDN3Q96TC7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RMDN3Q96TC7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RMDN3Q96TC7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RMDN3Q96TC7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
RMDN3Q96TC7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RMDN3Q96TC7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RMDN3Q96TC7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RMDN3Q96TC7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RMDN3Q96TC7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC26.26■■□□□ 1.79
RMDN3Q96TC7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC26.26■■□□□ 1.79
RMDN3Q96TC7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
RMDN3Q96TC7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.26■■□□□ 1.79
RMDN3Q96TC7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RMDN3Q96TC7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RMDN3Q96TC7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RMDN3Q96TC7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.25■■□□□ 1.79
RMDN3Q96TC7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26.25■■□□□ 1.79
RMDN3Q96TC7 AL139246.5-201ENST00000606645 996 ntBASIC26.25■■□□□ 1.79
RMDN3Q96TC7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.25■■□□□ 1.79
RMDN3Q96TC7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
RMDN3Q96TC7 AC005703.6-201ENST00000623265 1329 ntBASIC26.24■■□□□ 1.79
RMDN3Q96TC7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
RMDN3Q96TC7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
RMDN3Q96TC7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
RMDN3Q96TC7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RMDN3Q96TC7 AL022069.1-201ENST00000568025 1636 ntBASIC26.24■■□□□ 1.79
RMDN3Q96TC7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RMDN3Q96TC7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RMDN3Q96TC7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.23■■□□□ 1.79
RMDN3Q96TC7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RMDN3Q96TC7 REST-206ENST00000612429 1376 ntTSL 5 BASIC26.23■■□□□ 1.79
RMDN3Q96TC7 REST-207ENST00000616975 1370 ntTSL 5 BASIC26.23■■□□□ 1.79
RMDN3Q96TC7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RMDN3Q96TC7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RMDN3Q96TC7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RMDN3Q96TC7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
RMDN3Q96TC7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RMDN3Q96TC7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RMDN3Q96TC7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RMDN3Q96TC7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC26.22■■□□□ 1.79
RMDN3Q96TC7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RMDN3Q96TC7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RMDN3Q96TC7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RMDN3Q96TC7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.22■■□□□ 1.79
RMDN3Q96TC7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RMDN3Q96TC7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RMDN3Q96TC7 MIR638-201ENST00000385237 100 ntBASIC26.21■■□□□ 1.79
RMDN3Q96TC7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms