Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CDK5RAP1Q96SZ6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.07■■□□□ 1.44
CDK5RAP1Q96SZ6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.07■■□□□ 1.44
CDK5RAP1Q96SZ6 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CDK5RAP1Q96SZ6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CDK5RAP1Q96SZ6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CDK5RAP1Q96SZ6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CDK5RAP1Q96SZ6 AC142381.3-201ENST00000568208 1670 ntBASIC24.06■■□□□ 1.44
CDK5RAP1Q96SZ6 AC135731.1-201ENST00000569415 2548 ntBASIC24.06■■□□□ 1.44
CDK5RAP1Q96SZ6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDK5RAP1Q96SZ6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.06■■□□□ 1.44
CDK5RAP1Q96SZ6 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.06■■□□□ 1.44
CDK5RAP1Q96SZ6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.06■■□□□ 1.44
CDK5RAP1Q96SZ6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDK5RAP1Q96SZ6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.06■■□□□ 1.44
CDK5RAP1Q96SZ6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDK5RAP1Q96SZ6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.06■■□□□ 1.44
CDK5RAP1Q96SZ6 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDK5RAP1Q96SZ6 AC131274.2-201ENST00000580697 1507 ntBASIC24.05■■□□□ 1.44
CDK5RAP1Q96SZ6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.05■■□□□ 1.44
CDK5RAP1Q96SZ6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.05■■□□□ 1.44
CDK5RAP1Q96SZ6 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CDK5RAP1Q96SZ6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDK5RAP1Q96SZ6 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CDK5RAP1Q96SZ6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDK5RAP1Q96SZ6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CDK5RAP1Q96SZ6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.04■■□□□ 1.44
CDK5RAP1Q96SZ6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CDK5RAP1Q96SZ6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.04■■□□□ 1.44
CDK5RAP1Q96SZ6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CDK5RAP1Q96SZ6 AL356740.2-201ENST00000601559 647 ntBASIC24.04■■□□□ 1.44
CDK5RAP1Q96SZ6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CDK5RAP1Q96SZ6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CDK5RAP1Q96SZ6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CDK5RAP1Q96SZ6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDK5RAP1Q96SZ6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDK5RAP1Q96SZ6 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.03■■□□□ 1.44
CDK5RAP1Q96SZ6 AL117332.1-201ENST00000622628 974 ntBASIC24.03■■□□□ 1.44
CDK5RAP1Q96SZ6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CDK5RAP1Q96SZ6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDK5RAP1Q96SZ6 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDK5RAP1Q96SZ6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CDK5RAP1Q96SZ6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CDK5RAP1Q96SZ6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.02■■□□□ 1.44
CDK5RAP1Q96SZ6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.02■■□□□ 1.44
CDK5RAP1Q96SZ6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.02■■□□□ 1.44
CDK5RAP1Q96SZ6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.02■■□□□ 1.44
CDK5RAP1Q96SZ6 MIR3621-201ENST00000580529 85 ntBASIC24.02■■□□□ 1.44
CDK5RAP1Q96SZ6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.02■■□□□ 1.44
CDK5RAP1Q96SZ6 HLA-L-211ENST00000482052 1765 ntBASIC24.01■■□□□ 1.43
CDK5RAP1Q96SZ6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CDK5RAP1Q96SZ6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CDK5RAP1Q96SZ6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.01■■□□□ 1.43
CDK5RAP1Q96SZ6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.01■■□□□ 1.43
CDK5RAP1Q96SZ6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
CDK5RAP1Q96SZ6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
CDK5RAP1Q96SZ6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24■■□□□ 1.43
CDK5RAP1Q96SZ6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CDK5RAP1Q96SZ6 AK3-203ENST00000447596 705 ntTSL 2 BASIC24■■□□□ 1.43
CDK5RAP1Q96SZ6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24■■□□□ 1.43
CDK5RAP1Q96SZ6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24■■□□□ 1.43
CDK5RAP1Q96SZ6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CDK5RAP1Q96SZ6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
CDK5RAP1Q96SZ6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
CDK5RAP1Q96SZ6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24■■□□□ 1.43
CDK5RAP1Q96SZ6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDK5RAP1Q96SZ6 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDK5RAP1Q96SZ6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDK5RAP1Q96SZ6 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CDK5RAP1Q96SZ6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CDK5RAP1Q96SZ6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.99■■□□□ 1.43
CDK5RAP1Q96SZ6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDK5RAP1Q96SZ6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDK5RAP1Q96SZ6 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDK5RAP1Q96SZ6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CDK5RAP1Q96SZ6 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
CDK5RAP1Q96SZ6 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CDK5RAP1Q96SZ6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CDK5RAP1Q96SZ6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDK5RAP1Q96SZ6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDK5RAP1Q96SZ6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CDK5RAP1Q96SZ6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDK5RAP1Q96SZ6 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.98■■□□□ 1.43
CDK5RAP1Q96SZ6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.98■■□□□ 1.43
CDK5RAP1Q96SZ6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CDK5RAP1Q96SZ6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.97■■□□□ 1.43
CDK5RAP1Q96SZ6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.97■■□□□ 1.43
CDK5RAP1Q96SZ6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CDK5RAP1Q96SZ6 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.97■■□□□ 1.43
CDK5RAP1Q96SZ6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.97■■□□□ 1.43
CDK5RAP1Q96SZ6 AC008406.3-201ENST00000620001 1374 ntBASIC23.97■■□□□ 1.43
CDK5RAP1Q96SZ6 AC005703.6-201ENST00000623265 1329 ntBASIC23.97■■□□□ 1.43
CDK5RAP1Q96SZ6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.97■■□□□ 1.43
CDK5RAP1Q96SZ6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDK5RAP1Q96SZ6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CDK5RAP1Q96SZ6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDK5RAP1Q96SZ6 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.96■■□□□ 1.43
CDK5RAP1Q96SZ6 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.96■■□□□ 1.43
CDK5RAP1Q96SZ6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.96■■□□□ 1.43
CDK5RAP1Q96SZ6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms