Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
NEK1Q96PY6 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
NEK1Q96PY6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
NEK1Q96PY6 KRT8P33-201ENST00000508125 1423 ntBASIC27.41■■□□□ 1.98
NEK1Q96PY6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC27.41■■□□□ 1.98
NEK1Q96PY6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
NEK1Q96PY6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC27.41■■□□□ 1.98
NEK1Q96PY6 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC27.41■■□□□ 1.98
NEK1Q96PY6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC27.41■■□□□ 1.98
NEK1Q96PY6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
NEK1Q96PY6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
NEK1Q96PY6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
NEK1Q96PY6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC27.4■■□□□ 1.98
NEK1Q96PY6 THA1P-201ENST00000590384 1145 ntBASIC27.4■■□□□ 1.98
NEK1Q96PY6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC27.4■■□□□ 1.98
NEK1Q96PY6 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
NEK1Q96PY6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC27.39■■□□□ 1.98
NEK1Q96PY6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
NEK1Q96PY6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
NEK1Q96PY6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
NEK1Q96PY6 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC27.38■■□□□ 1.97
NEK1Q96PY6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
NEK1Q96PY6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
NEK1Q96PY6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
NEK1Q96PY6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
NEK1Q96PY6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
NEK1Q96PY6 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
NEK1Q96PY6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC27.38■■□□□ 1.97
NEK1Q96PY6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
NEK1Q96PY6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
NEK1Q96PY6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
NEK1Q96PY6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
NEK1Q96PY6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
NEK1Q96PY6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
NEK1Q96PY6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
NEK1Q96PY6 YBX1P4-201ENST00000392794 808 ntBASIC27.37■■□□□ 1.97
NEK1Q96PY6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC27.37■■□□□ 1.97
NEK1Q96PY6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC27.36■■□□□ 1.97
NEK1Q96PY6 ABCB10P4-201ENST00000566803 2184 ntBASIC27.36■■□□□ 1.97
NEK1Q96PY6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
NEK1Q96PY6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC27.36■■□□□ 1.97
NEK1Q96PY6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC27.36■■□□□ 1.97
NEK1Q96PY6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
NEK1Q96PY6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
NEK1Q96PY6 MIR4281-201ENST00000580852 62 ntBASIC27.36■■□□□ 1.97
NEK1Q96PY6 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
NEK1Q96PY6 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
NEK1Q96PY6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
NEK1Q96PY6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
NEK1Q96PY6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC27.35■■□□□ 1.97
NEK1Q96PY6 AC103724.3-201ENST00000564481 992 ntBASIC27.35■■□□□ 1.97
NEK1Q96PY6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC27.35■■□□□ 1.97
NEK1Q96PY6 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
NEK1Q96PY6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
NEK1Q96PY6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
NEK1Q96PY6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
NEK1Q96PY6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC27.34■■□□□ 1.97
NEK1Q96PY6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
NEK1Q96PY6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
NEK1Q96PY6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC27.33■■□□□ 1.97
NEK1Q96PY6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
NEK1Q96PY6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC27.33■■□□□ 1.97
NEK1Q96PY6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
NEK1Q96PY6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
NEK1Q96PY6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
NEK1Q96PY6 AF131216.4-201ENST00000638924 1588 ntBASIC27.32■■□□□ 1.96
NEK1Q96PY6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC27.32■■□□□ 1.96
NEK1Q96PY6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
NEK1Q96PY6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
NEK1Q96PY6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
NEK1Q96PY6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC27.32■■□□□ 1.96
NEK1Q96PY6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
NEK1Q96PY6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
NEK1Q96PY6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC27.31■■□□□ 1.96
NEK1Q96PY6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
NEK1Q96PY6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
NEK1Q96PY6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
NEK1Q96PY6 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
NEK1Q96PY6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
NEK1Q96PY6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
NEK1Q96PY6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC27.3■■□□□ 1.96
NEK1Q96PY6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
NEK1Q96PY6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC27.3■■□□□ 1.96
NEK1Q96PY6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
NEK1Q96PY6 AL161729.1-201ENST00000604104 1402 ntBASIC27.3■■□□□ 1.96
NEK1Q96PY6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
NEK1Q96PY6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
NEK1Q96PY6 AC131274.2-201ENST00000580697 1507 ntBASIC27.3■■□□□ 1.96
NEK1Q96PY6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
NEK1Q96PY6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC27.29■■□□□ 1.96
NEK1Q96PY6 AL022069.1-201ENST00000568025 1636 ntBASIC27.29■■□□□ 1.96
NEK1Q96PY6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
NEK1Q96PY6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
NEK1Q96PY6 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
NEK1Q96PY6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
NEK1Q96PY6 LBH-205ENST00000407930 756 ntTSL 2 BASIC27.28■■□□□ 1.96
NEK1Q96PY6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
NEK1Q96PY6 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
NEK1Q96PY6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC27.28■■□□□ 1.96
NEK1Q96PY6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC27.28■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms