Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CMTM3Q96MX0 AL162393.1-201ENST00000437852 946 ntBASIC19.89■□□□□ 0.77
CMTM3Q96MX0 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.89■□□□□ 0.77
CMTM3Q96MX0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.89■□□□□ 0.77
CMTM3Q96MX0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CMTM3Q96MX0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CMTM3Q96MX0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CMTM3Q96MX0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CMTM3Q96MX0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CMTM3Q96MX0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CMTM3Q96MX0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CMTM3Q96MX0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.88■□□□□ 0.77
CMTM3Q96MX0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CMTM3Q96MX0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CMTM3Q96MX0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CMTM3Q96MX0 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CMTM3Q96MX0 GUSBP5-202ENST00000510805 1989 ntBASIC19.88■□□□□ 0.77
CMTM3Q96MX0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.88■□□□□ 0.77
CMTM3Q96MX0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.87■□□□□ 0.77
CMTM3Q96MX0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
CMTM3Q96MX0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CMTM3Q96MX0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
CMTM3Q96MX0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.87■□□□□ 0.77
CMTM3Q96MX0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CMTM3Q96MX0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CMTM3Q96MX0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CMTM3Q96MX0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CMTM3Q96MX0 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
CMTM3Q96MX0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CMTM3Q96MX0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CMTM3Q96MX0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CMTM3Q96MX0 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CMTM3Q96MX0 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CMTM3Q96MX0 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CMTM3Q96MX0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CMTM3Q96MX0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CMTM3Q96MX0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CMTM3Q96MX0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CMTM3Q96MX0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CMTM3Q96MX0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CMTM3Q96MX0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CMTM3Q96MX0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CMTM3Q96MX0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CMTM3Q96MX0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CMTM3Q96MX0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CMTM3Q96MX0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
CMTM3Q96MX0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.85■□□□□ 0.77
CMTM3Q96MX0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.85■□□□□ 0.77
CMTM3Q96MX0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CMTM3Q96MX0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CMTM3Q96MX0 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CMTM3Q96MX0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CMTM3Q96MX0 C1orf229-201ENST00000623686 2258 ntBASIC19.85■□□□□ 0.77
CMTM3Q96MX0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CMTM3Q96MX0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CMTM3Q96MX0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CMTM3Q96MX0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CMTM3Q96MX0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.84■□□□□ 0.77
CMTM3Q96MX0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CMTM3Q96MX0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CMTM3Q96MX0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.84■□□□□ 0.77
CMTM3Q96MX0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CMTM3Q96MX0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.84■□□□□ 0.77
CMTM3Q96MX0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CMTM3Q96MX0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.83■□□□□ 0.77
CMTM3Q96MX0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.83■□□□□ 0.77
CMTM3Q96MX0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.83■□□□□ 0.77
CMTM3Q96MX0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CMTM3Q96MX0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CMTM3Q96MX0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CMTM3Q96MX0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CMTM3Q96MX0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CMTM3Q96MX0 MIR3960-201ENST00000583311 91 ntBASIC19.83■□□□□ 0.77
CMTM3Q96MX0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CMTM3Q96MX0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CMTM3Q96MX0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.83■□□□□ 0.76
CMTM3Q96MX0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CMTM3Q96MX0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CMTM3Q96MX0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CMTM3Q96MX0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CMTM3Q96MX0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CMTM3Q96MX0 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.82■□□□□ 0.76
CMTM3Q96MX0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.82■□□□□ 0.76
CMTM3Q96MX0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.82■□□□□ 0.76
CMTM3Q96MX0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CMTM3Q96MX0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.82■□□□□ 0.76
CMTM3Q96MX0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CMTM3Q96MX0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CMTM3Q96MX0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CMTM3Q96MX0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CMTM3Q96MX0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CMTM3Q96MX0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.81■□□□□ 0.76
CMTM3Q96MX0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CMTM3Q96MX0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.81■□□□□ 0.76
CMTM3Q96MX0 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CMTM3Q96MX0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CMTM3Q96MX0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.81■□□□□ 0.76
CMTM3Q96MX0 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CMTM3Q96MX0 AC025884.2-201ENST00000553429 711 ntBASIC19.81■□□□□ 0.76
CMTM3Q96MX0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms