Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PRICKLE1Q96MT3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.92■■□□□ 1.42
PRICKLE1Q96MT3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.92■■□□□ 1.42
PRICKLE1Q96MT3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.91■■□□□ 1.42
PRICKLE1Q96MT3 AC020928.2-201ENST00000588717 2197 ntBASIC23.91■■□□□ 1.42
PRICKLE1Q96MT3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PRICKLE1Q96MT3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PRICKLE1Q96MT3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PRICKLE1Q96MT3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.91■■□□□ 1.42
PRICKLE1Q96MT3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
PRICKLE1Q96MT3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.91■■□□□ 1.42
PRICKLE1Q96MT3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.91■■□□□ 1.42
PRICKLE1Q96MT3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PRICKLE1Q96MT3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.91■■□□□ 1.42
PRICKLE1Q96MT3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
PRICKLE1Q96MT3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PRICKLE1Q96MT3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PRICKLE1Q96MT3 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.9■■□□□ 1.42
PRICKLE1Q96MT3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PRICKLE1Q96MT3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.9■■□□□ 1.42
PRICKLE1Q96MT3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.9■■□□□ 1.42
PRICKLE1Q96MT3 SNX5-217ENST00000606557 1087 ntBASIC23.9■■□□□ 1.42
PRICKLE1Q96MT3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PRICKLE1Q96MT3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.9■■□□□ 1.42
PRICKLE1Q96MT3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PRICKLE1Q96MT3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.9■■□□□ 1.42
PRICKLE1Q96MT3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.9■■□□□ 1.42
PRICKLE1Q96MT3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PRICKLE1Q96MT3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
PRICKLE1Q96MT3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PRICKLE1Q96MT3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.89■■□□□ 1.41
PRICKLE1Q96MT3 AC131212.1-201ENST00000613771 668 ntBASIC23.89■■□□□ 1.41
PRICKLE1Q96MT3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
PRICKLE1Q96MT3 AC093323.1-202ENST00000635031 2045 ntBASIC23.89■■□□□ 1.41
PRICKLE1Q96MT3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
PRICKLE1Q96MT3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PRICKLE1Q96MT3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
PRICKLE1Q96MT3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.88■■□□□ 1.41
PRICKLE1Q96MT3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PRICKLE1Q96MT3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.87■■□□□ 1.41
PRICKLE1Q96MT3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.87■■□□□ 1.41
PRICKLE1Q96MT3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PRICKLE1Q96MT3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.87■■□□□ 1.41
PRICKLE1Q96MT3 MTDHP2-201ENST00000601468 714 ntBASIC23.87■■□□□ 1.41
PRICKLE1Q96MT3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.87■■□□□ 1.41
PRICKLE1Q96MT3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.87■■□□□ 1.41
PRICKLE1Q96MT3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PRICKLE1Q96MT3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PRICKLE1Q96MT3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.86■■□□□ 1.41
PRICKLE1Q96MT3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PRICKLE1Q96MT3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PRICKLE1Q96MT3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PRICKLE1Q96MT3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PRICKLE1Q96MT3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PRICKLE1Q96MT3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
PRICKLE1Q96MT3 AC010997.5-201ENST00000609182 354 ntBASIC23.86■■□□□ 1.41
PRICKLE1Q96MT3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.86■■□□□ 1.41
PRICKLE1Q96MT3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PRICKLE1Q96MT3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.86■■□□□ 1.41
PRICKLE1Q96MT3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
PRICKLE1Q96MT3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PRICKLE1Q96MT3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.85■■□□□ 1.41
PRICKLE1Q96MT3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.85■■□□□ 1.41
PRICKLE1Q96MT3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PRICKLE1Q96MT3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PRICKLE1Q96MT3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.85■■□□□ 1.41
PRICKLE1Q96MT3 AC131274.2-201ENST00000580697 1507 ntBASIC23.84■■□□□ 1.41
PRICKLE1Q96MT3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PRICKLE1Q96MT3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.84■■□□□ 1.41
PRICKLE1Q96MT3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PRICKLE1Q96MT3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.84■■□□□ 1.41
PRICKLE1Q96MT3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.84■■□□□ 1.41
PRICKLE1Q96MT3 AC138932.3-201ENST00000567634 1902 ntBASIC23.84■■□□□ 1.41
PRICKLE1Q96MT3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.84■■□□□ 1.41
PRICKLE1Q96MT3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.84■■□□□ 1.41
PRICKLE1Q96MT3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PRICKLE1Q96MT3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PRICKLE1Q96MT3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PRICKLE1Q96MT3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.83■■□□□ 1.41
PRICKLE1Q96MT3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PRICKLE1Q96MT3 HLA-L-211ENST00000482052 1765 ntBASIC23.83■■□□□ 1.4
PRICKLE1Q96MT3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.83■■□□□ 1.4
PRICKLE1Q96MT3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRICKLE1Q96MT3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRICKLE1Q96MT3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRICKLE1Q96MT3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.82■■□□□ 1.4
PRICKLE1Q96MT3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.82■■□□□ 1.4
PRICKLE1Q96MT3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.82■■□□□ 1.4
PRICKLE1Q96MT3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRICKLE1Q96MT3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PRICKLE1Q96MT3 AC142381.3-201ENST00000568208 1670 ntBASIC23.82■■□□□ 1.4
PRICKLE1Q96MT3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRICKLE1Q96MT3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.81■■□□□ 1.4
PRICKLE1Q96MT3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.81■■□□□ 1.4
PRICKLE1Q96MT3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
PRICKLE1Q96MT3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PRICKLE1Q96MT3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PRICKLE1Q96MT3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.81■■□□□ 1.4
PRICKLE1Q96MT3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
PRICKLE1Q96MT3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms