Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.46■□□□□ 0.87
APH1AQ96BI3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.46■□□□□ 0.87
APH1AQ96BI3 TSPY9P-201ENST00000440215 945 ntBASIC20.46■□□□□ 0.87
APH1AQ96BI3 TSPY11P-201ENST00000442607 1045 ntBASIC20.46■□□□□ 0.87
APH1AQ96BI3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
APH1AQ96BI3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
APH1AQ96BI3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.46■□□□□ 0.87
APH1AQ96BI3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APH1AQ96BI3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APH1AQ96BI3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
APH1AQ96BI3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
APH1AQ96BI3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
APH1AQ96BI3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
APH1AQ96BI3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APH1AQ96BI3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APH1AQ96BI3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
APH1AQ96BI3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
APH1AQ96BI3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
APH1AQ96BI3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
APH1AQ96BI3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
APH1AQ96BI3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
APH1AQ96BI3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.45■□□□□ 0.86
APH1AQ96BI3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.45■□□□□ 0.86
APH1AQ96BI3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.45■□□□□ 0.86
APH1AQ96BI3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
APH1AQ96BI3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
APH1AQ96BI3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.44■□□□□ 0.86
APH1AQ96BI3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
APH1AQ96BI3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
APH1AQ96BI3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.44■□□□□ 0.86
APH1AQ96BI3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
APH1AQ96BI3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
APH1AQ96BI3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.44■□□□□ 0.86
APH1AQ96BI3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
APH1AQ96BI3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
APH1AQ96BI3 AL022069.1-201ENST00000568025 1636 ntBASIC20.43■□□□□ 0.86
APH1AQ96BI3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.43■□□□□ 0.86
APH1AQ96BI3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
APH1AQ96BI3 MTDHP2-201ENST00000601468 714 ntBASIC20.43■□□□□ 0.86
APH1AQ96BI3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.43■□□□□ 0.86
APH1AQ96BI3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.43■□□□□ 0.86
APH1AQ96BI3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
APH1AQ96BI3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.43■□□□□ 0.86
APH1AQ96BI3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
APH1AQ96BI3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.43■□□□□ 0.86
APH1AQ96BI3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
APH1AQ96BI3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APH1AQ96BI3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.42■□□□□ 0.86
APH1AQ96BI3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.42■□□□□ 0.86
APH1AQ96BI3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APH1AQ96BI3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APH1AQ96BI3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
APH1AQ96BI3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
APH1AQ96BI3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APH1AQ96BI3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.42■□□□□ 0.86
APH1AQ96BI3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.42■□□□□ 0.86
APH1AQ96BI3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.42■□□□□ 0.86
APH1AQ96BI3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APH1AQ96BI3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.42■□□□□ 0.86
APH1AQ96BI3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.42■□□□□ 0.86
APH1AQ96BI3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
APH1AQ96BI3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.41■□□□□ 0.86
APH1AQ96BI3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
APH1AQ96BI3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
APH1AQ96BI3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
APH1AQ96BI3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
APH1AQ96BI3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.41■□□□□ 0.86
APH1AQ96BI3 UNC93B8-201ENST00000511903 705 ntBASIC20.41■□□□□ 0.86
APH1AQ96BI3 SNX5-217ENST00000606557 1087 ntBASIC20.41■□□□□ 0.86
APH1AQ96BI3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
APH1AQ96BI3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
APH1AQ96BI3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
APH1AQ96BI3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.41■□□□□ 0.86
APH1AQ96BI3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
APH1AQ96BI3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
APH1AQ96BI3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
APH1AQ96BI3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
APH1AQ96BI3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.4■□□□□ 0.86
APH1AQ96BI3 KRT16P3-201ENST00000439127 1283 ntBASIC20.4■□□□□ 0.86
APH1AQ96BI3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
APH1AQ96BI3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.4■□□□□ 0.86
APH1AQ96BI3 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.4■□□□□ 0.86
APH1AQ96BI3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.4■□□□□ 0.86
APH1AQ96BI3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.4■□□□□ 0.86
APH1AQ96BI3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
APH1AQ96BI3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.39■□□□□ 0.85
APH1AQ96BI3 AC131274.2-201ENST00000580697 1507 ntBASIC20.39■□□□□ 0.85
APH1AQ96BI3 AL356441.2-201ENST00000443009 864 ntBASIC20.39■□□□□ 0.85
APH1AQ96BI3 AC004448.1-201ENST00000458332 883 ntBASIC20.39■□□□□ 0.85
APH1AQ96BI3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.39■□□□□ 0.85
APH1AQ96BI3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
APH1AQ96BI3 AC010997.5-201ENST00000609182 354 ntBASIC20.39■□□□□ 0.85
APH1AQ96BI3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
APH1AQ96BI3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
APH1AQ96BI3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
APH1AQ96BI3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APH1AQ96BI3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
APH1AQ96BI3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.38■□□□□ 0.85
APH1AQ96BI3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
APH1AQ96BI3 AL161729.1-201ENST00000604104 1402 ntBASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms