Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 MIR5787-201ENST00000611784 55 ntBASIC28.79■■■□□ 2.2
RPGRQ92834 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC28.79■■■□□ 2.2
RPGRQ92834 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC28.79■■■□□ 2.2
RPGRQ92834 MIR939-201ENST00000401314 82 ntBASIC28.78■■■□□ 2.2
RPGRQ92834 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC28.78■■■□□ 2.2
RPGRQ92834 SYT6-210ENST00000641643 1587 ntBASIC28.78■■■□□ 2.2
RPGRQ92834 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
RPGRQ92834 REST-206ENST00000612429 1376 ntTSL 5 BASIC28.77■■■□□ 2.2
RPGRQ92834 REST-207ENST00000616975 1370 ntTSL 5 BASIC28.77■■■□□ 2.2
RPGRQ92834 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC28.77■■■□□ 2.2
RPGRQ92834 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
RPGRQ92834 AP001330.3-201ENST00000520123 633 ntBASIC28.77■■■□□ 2.2
RPGRQ92834 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC28.77■■■□□ 2.2
RPGRQ92834 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
RPGRQ92834 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
RPGRQ92834 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.2
RPGRQ92834 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
RPGRQ92834 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
RPGRQ92834 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
RPGRQ92834 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC28.76■■■□□ 2.19
RPGRQ92834 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
RPGRQ92834 AC092171.4-201ENST00000609130 632 ntBASIC28.76■■■□□ 2.19
RPGRQ92834 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
RPGRQ92834 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
RPGRQ92834 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
RPGRQ92834 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC28.75■■■□□ 2.19
RPGRQ92834 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
RPGRQ92834 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC28.75■■■□□ 2.19
RPGRQ92834 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
RPGRQ92834 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
RPGRQ92834 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
RPGRQ92834 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC28.74■■■□□ 2.19
RPGRQ92834 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
RPGRQ92834 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.74■■■□□ 2.19
RPGRQ92834 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC28.73■■■□□ 2.19
RPGRQ92834 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
RPGRQ92834 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
RPGRQ92834 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
RPGRQ92834 AC104564.3-201ENST00000582367 638 ntBASIC28.73■■■□□ 2.19
RPGRQ92834 MIR4767-201ENST00000582827 78 ntBASIC28.73■■■□□ 2.19
RPGRQ92834 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
RPGRQ92834 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
RPGRQ92834 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC28.73■■■□□ 2.19
RPGRQ92834 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
RPGRQ92834 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC28.72■■■□□ 2.19
RPGRQ92834 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC28.72■■■□□ 2.19
RPGRQ92834 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
RPGRQ92834 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC28.72■■■□□ 2.19
RPGRQ92834 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
RPGRQ92834 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
RPGRQ92834 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC28.71■■■□□ 2.19
RPGRQ92834 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC28.71■■■□□ 2.19
RPGRQ92834 AC091305.1-201ENST00000479476 895 ntBASIC28.71■■■□□ 2.19
RPGRQ92834 STOX2-205ENST00000513034 807 ntTSL 3 BASIC28.71■■■□□ 2.19
RPGRQ92834 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
RPGRQ92834 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC28.71■■■□□ 2.19
RPGRQ92834 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.19
RPGRQ92834 PTMA-205ENST00000410064 814 ntTSL 2 BASIC28.7■■■□□ 2.18
RPGRQ92834 RBM38-205ENST00000440234 686 ntTSL 2 BASIC28.7■■■□□ 2.18
RPGRQ92834 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC28.7■■■□□ 2.18
RPGRQ92834 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.18
RPGRQ92834 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
RPGRQ92834 AC131274.2-201ENST00000580697 1507 ntBASIC28.69■■■□□ 2.18
RPGRQ92834 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC28.69■■■□□ 2.18
RPGRQ92834 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
RPGRQ92834 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
RPGRQ92834 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC28.69■■■□□ 2.18
RPGRQ92834 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
RPGRQ92834 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
RPGRQ92834 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
RPGRQ92834 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
RPGRQ92834 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
RPGRQ92834 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC28.68■■■□□ 2.18
RPGRQ92834 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
RPGRQ92834 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
RPGRQ92834 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
RPGRQ92834 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC28.67■■■□□ 2.18
RPGRQ92834 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
RPGRQ92834 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
RPGRQ92834 SERBP1P1-201ENST00000396021 1160 ntBASIC28.67■■■□□ 2.18
RPGRQ92834 STK32C-205ENST00000456004 607 ntTSL 2 BASIC28.67■■■□□ 2.18
RPGRQ92834 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
RPGRQ92834 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
RPGRQ92834 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC28.66■■■□□ 2.18
RPGRQ92834 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC28.66■■■□□ 2.18
RPGRQ92834 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
RPGRQ92834 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC28.66■■■□□ 2.18
RPGRQ92834 AC099791.2-201ENST00000605725 427 ntBASIC28.66■■■□□ 2.18
RPGRQ92834 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
RPGRQ92834 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC28.65■■■□□ 2.18
RPGRQ92834 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC28.65■■■□□ 2.18
RPGRQ92834 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
RPGRQ92834 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC28.65■■■□□ 2.18
RPGRQ92834 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.18
RPGRQ92834 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
RPGRQ92834 AC092803.2-201ENST00000564287 1899 ntBASIC28.64■■■□□ 2.18
RPGRQ92834 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC28.64■■■□□ 2.18
RPGRQ92834 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
RPGRQ92834 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.18
RPGRQ92834 PTCHD3P2-201ENST00000424937 1205 ntBASIC28.64■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms