Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.72■■□□□ 1.07
TM9SF4Q92544 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TM9SF4Q92544 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.71■■□□□ 1.07
TM9SF4Q92544 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TM9SF4Q92544 AC131281.2-201ENST00000520478 145 ntBASIC21.71■■□□□ 1.07
TM9SF4Q92544 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TM9SF4Q92544 AL117332.1-201ENST00000622628 974 ntBASIC21.71■■□□□ 1.07
TM9SF4Q92544 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.71■■□□□ 1.07
TM9SF4Q92544 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
TM9SF4Q92544 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TM9SF4Q92544 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TM9SF4Q92544 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TM9SF4Q92544 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TM9SF4Q92544 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TM9SF4Q92544 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TM9SF4Q92544 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.7■■□□□ 1.06
TM9SF4Q92544 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TM9SF4Q92544 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TM9SF4Q92544 AL136116.3-201ENST00000402907 1138 ntBASIC21.7■■□□□ 1.06
TM9SF4Q92544 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
TM9SF4Q92544 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.7■■□□□ 1.06
TM9SF4Q92544 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TM9SF4Q92544 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.7■■□□□ 1.06
TM9SF4Q92544 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TM9SF4Q92544 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TM9SF4Q92544 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TM9SF4Q92544 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.69■■□□□ 1.06
TM9SF4Q92544 MIR3621-201ENST00000580529 85 ntBASIC21.69■■□□□ 1.06
TM9SF4Q92544 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
TM9SF4Q92544 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TM9SF4Q92544 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
TM9SF4Q92544 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TM9SF4Q92544 AL139125.2-201ENST00000623134 1869 ntBASIC21.69■■□□□ 1.06
TM9SF4Q92544 AC138932.3-201ENST00000567634 1902 ntBASIC21.68■■□□□ 1.06
TM9SF4Q92544 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.68■■□□□ 1.06
TM9SF4Q92544 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TM9SF4Q92544 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.68■■□□□ 1.06
TM9SF4Q92544 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.68■■□□□ 1.06
TM9SF4Q92544 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.68■■□□□ 1.06
TM9SF4Q92544 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TM9SF4Q92544 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TM9SF4Q92544 AC022211.4-201ENST00000625094 2161 ntBASIC21.68■■□□□ 1.06
TM9SF4Q92544 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.68■■□□□ 1.06
TM9SF4Q92544 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TM9SF4Q92544 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TM9SF4Q92544 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TM9SF4Q92544 MIR638-201ENST00000385237 100 ntBASIC21.67■■□□□ 1.06
TM9SF4Q92544 MIR935-201ENST00000401179 91 ntBASIC21.67■■□□□ 1.06
TM9SF4Q92544 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.67■■□□□ 1.06
TM9SF4Q92544 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.67■■□□□ 1.06
TM9SF4Q92544 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.67■■□□□ 1.06
TM9SF4Q92544 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
TM9SF4Q92544 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TM9SF4Q92544 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.66■■□□□ 1.06
TM9SF4Q92544 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TM9SF4Q92544 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TM9SF4Q92544 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.66■■□□□ 1.06
TM9SF4Q92544 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
TM9SF4Q92544 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TM9SF4Q92544 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TM9SF4Q92544 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TM9SF4Q92544 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TM9SF4Q92544 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TM9SF4Q92544 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TM9SF4Q92544 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.65■■□□□ 1.06
TM9SF4Q92544 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.65■■□□□ 1.06
TM9SF4Q92544 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TM9SF4Q92544 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TM9SF4Q92544 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.65■■□□□ 1.06
TM9SF4Q92544 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TM9SF4Q92544 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.65■■□□□ 1.06
TM9SF4Q92544 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.65■■□□□ 1.06
TM9SF4Q92544 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
TM9SF4Q92544 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TM9SF4Q92544 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
TM9SF4Q92544 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
TM9SF4Q92544 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.64■■□□□ 1.05
TM9SF4Q92544 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.64■■□□□ 1.05
TM9SF4Q92544 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TM9SF4Q92544 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.64■■□□□ 1.05
TM9SF4Q92544 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.64■■□□□ 1.05
TM9SF4Q92544 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TM9SF4Q92544 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.64■■□□□ 1.05
TM9SF4Q92544 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TM9SF4Q92544 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.63■■□□□ 1.05
TM9SF4Q92544 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TM9SF4Q92544 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TM9SF4Q92544 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TM9SF4Q92544 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TM9SF4Q92544 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TM9SF4Q92544 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
TM9SF4Q92544 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
TM9SF4Q92544 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TM9SF4Q92544 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.62■■□□□ 1.05
TM9SF4Q92544 FOXO3B-201ENST00000395675 1928 ntBASIC21.62■■□□□ 1.05
TM9SF4Q92544 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TM9SF4Q92544 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TM9SF4Q92544 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.61■■□□□ 1.05
TM9SF4Q92544 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.61■■□□□ 1.05
TM9SF4Q92544 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms