Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
STAG1Q8WVM7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC27.37■■□□□ 1.97
STAG1Q8WVM7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
STAG1Q8WVM7 AC131212.1-201ENST00000613771 668 ntBASIC27.37■■□□□ 1.97
STAG1Q8WVM7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC27.37■■□□□ 1.97
STAG1Q8WVM7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC27.36■■□□□ 1.97
STAG1Q8WVM7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC27.36■■□□□ 1.97
STAG1Q8WVM7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC27.36■■□□□ 1.97
STAG1Q8WVM7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
STAG1Q8WVM7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
STAG1Q8WVM7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC27.36■■□□□ 1.97
STAG1Q8WVM7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
STAG1Q8WVM7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC27.35■■□□□ 1.97
STAG1Q8WVM7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
STAG1Q8WVM7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
STAG1Q8WVM7 AL139125.2-201ENST00000623134 1869 ntBASIC27.35■■□□□ 1.97
STAG1Q8WVM7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
STAG1Q8WVM7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC27.35■■□□□ 1.97
STAG1Q8WVM7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
STAG1Q8WVM7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC27.34■■□□□ 1.97
STAG1Q8WVM7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
STAG1Q8WVM7 SNX5-217ENST00000606557 1087 ntBASIC27.34■■□□□ 1.97
STAG1Q8WVM7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
STAG1Q8WVM7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
STAG1Q8WVM7 AC135731.1-201ENST00000569415 2548 ntBASIC27.33■■□□□ 1.97
STAG1Q8WVM7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC27.33■■□□□ 1.97
STAG1Q8WVM7 UNC93B8-201ENST00000511903 705 ntBASIC27.33■■□□□ 1.97
STAG1Q8WVM7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC27.33■■□□□ 1.97
STAG1Q8WVM7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC27.32■■□□□ 1.96
STAG1Q8WVM7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC27.32■■□□□ 1.96
STAG1Q8WVM7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
STAG1Q8WVM7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
STAG1Q8WVM7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC27.32■■□□□ 1.96
STAG1Q8WVM7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC27.32■■□□□ 1.96
STAG1Q8WVM7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC27.32■■□□□ 1.96
STAG1Q8WVM7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
STAG1Q8WVM7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
STAG1Q8WVM7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
STAG1Q8WVM7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC27.32■■□□□ 1.96
STAG1Q8WVM7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC27.32■■□□□ 1.96
STAG1Q8WVM7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
STAG1Q8WVM7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
STAG1Q8WVM7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
STAG1Q8WVM7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
STAG1Q8WVM7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
STAG1Q8WVM7 AC004448.1-201ENST00000458332 883 ntBASIC27.31■■□□□ 1.96
STAG1Q8WVM7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC27.31■■□□□ 1.96
STAG1Q8WVM7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC27.31■■□□□ 1.96
STAG1Q8WVM7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
STAG1Q8WVM7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC27.31■■□□□ 1.96
STAG1Q8WVM7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
STAG1Q8WVM7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
STAG1Q8WVM7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC27.3■■□□□ 1.96
STAG1Q8WVM7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
STAG1Q8WVM7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC27.3■■□□□ 1.96
STAG1Q8WVM7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC27.3■■□□□ 1.96
STAG1Q8WVM7 GRAMD4P7-201ENST00000578182 1232 ntBASIC27.3■■□□□ 1.96
STAG1Q8WVM7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
STAG1Q8WVM7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
STAG1Q8WVM7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC27.3■■□□□ 1.96
STAG1Q8WVM7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
STAG1Q8WVM7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
STAG1Q8WVM7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
STAG1Q8WVM7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC27.29■■□□□ 1.96
STAG1Q8WVM7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC27.29■■□□□ 1.96
STAG1Q8WVM7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC27.29■■□□□ 1.96
STAG1Q8WVM7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC27.29■■□□□ 1.96
STAG1Q8WVM7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC27.29■■□□□ 1.96
STAG1Q8WVM7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
STAG1Q8WVM7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC27.29■■□□□ 1.96
STAG1Q8WVM7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC27.29■■□□□ 1.96
STAG1Q8WVM7 AL022069.1-201ENST00000568025 1636 ntBASIC27.29■■□□□ 1.96
STAG1Q8WVM7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
STAG1Q8WVM7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
STAG1Q8WVM7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
STAG1Q8WVM7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
STAG1Q8WVM7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
STAG1Q8WVM7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
STAG1Q8WVM7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
STAG1Q8WVM7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
STAG1Q8WVM7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
STAG1Q8WVM7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
STAG1Q8WVM7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC27.28■■□□□ 1.96
STAG1Q8WVM7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC27.28■■□□□ 1.96
STAG1Q8WVM7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
STAG1Q8WVM7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC27.28■■□□□ 1.96
STAG1Q8WVM7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC27.28■■□□□ 1.96
STAG1Q8WVM7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
STAG1Q8WVM7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
STAG1Q8WVM7 AL161729.1-201ENST00000604104 1402 ntBASIC27.27■■□□□ 1.96
STAG1Q8WVM7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
STAG1Q8WVM7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
STAG1Q8WVM7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC27.27■■□□□ 1.96
STAG1Q8WVM7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC27.27■■□□□ 1.96
STAG1Q8WVM7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
STAG1Q8WVM7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC27.27■■□□□ 1.96
STAG1Q8WVM7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC27.27■■□□□ 1.96
STAG1Q8WVM7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC27.27■■□□□ 1.96
STAG1Q8WVM7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
STAG1Q8WVM7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms