Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LINC01560Q8TB33 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LINC01560Q8TB33 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
LINC01560Q8TB33 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.12■□□□□ 0.81
LINC01560Q8TB33 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LINC01560Q8TB33 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.12■□□□□ 0.81
LINC01560Q8TB33 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
LINC01560Q8TB33 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.11■□□□□ 0.81
LINC01560Q8TB33 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.11■□□□□ 0.81
LINC01560Q8TB33 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LINC01560Q8TB33 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.11■□□□□ 0.81
LINC01560Q8TB33 AL031432.3-201ENST00000607698 485 ntBASIC20.11■□□□□ 0.81
LINC01560Q8TB33 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
LINC01560Q8TB33 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LINC01560Q8TB33 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
LINC01560Q8TB33 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LINC01560Q8TB33 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LINC01560Q8TB33 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LINC01560Q8TB33 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LINC01560Q8TB33 SUDS3P1-201ENST00000505831 966 ntBASIC20.1■□□□□ 0.81
LINC01560Q8TB33 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LINC01560Q8TB33 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LINC01560Q8TB33 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINC01560Q8TB33 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.09■□□□□ 0.81
LINC01560Q8TB33 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.09■□□□□ 0.81
LINC01560Q8TB33 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.09■□□□□ 0.81
LINC01560Q8TB33 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINC01560Q8TB33 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LINC01560Q8TB33 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINC01560Q8TB33 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINC01560Q8TB33 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.09■□□□□ 0.81
LINC01560Q8TB33 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LINC01560Q8TB33 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.09■□□□□ 0.81
LINC01560Q8TB33 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.09■□□□□ 0.81
LINC01560Q8TB33 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.09■□□□□ 0.81
LINC01560Q8TB33 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINC01560Q8TB33 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
LINC01560Q8TB33 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LINC01560Q8TB33 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.08■□□□□ 0.81
LINC01560Q8TB33 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LINC01560Q8TB33 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LINC01560Q8TB33 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.08■□□□□ 0.81
LINC01560Q8TB33 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.08■□□□□ 0.81
LINC01560Q8TB33 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
LINC01560Q8TB33 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.08■□□□□ 0.8
LINC01560Q8TB33 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LINC01560Q8TB33 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LINC01560Q8TB33 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LINC01560Q8TB33 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.07■□□□□ 0.8
LINC01560Q8TB33 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LINC01560Q8TB33 AL355001.2-201ENST00000620617 1191 ntBASIC20.07■□□□□ 0.8
LINC01560Q8TB33 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LINC01560Q8TB33 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LINC01560Q8TB33 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LINC01560Q8TB33 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LINC01560Q8TB33 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LINC01560Q8TB33 SLC6A10P-202ENST00000431994 2058 ntBASIC20.06■□□□□ 0.8
LINC01560Q8TB33 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LINC01560Q8TB33 EDA-201ENST00000338901 1233 ntBASIC20.06■□□□□ 0.8
LINC01560Q8TB33 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LINC01560Q8TB33 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LINC01560Q8TB33 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
LINC01560Q8TB33 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LINC01560Q8TB33 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.06■□□□□ 0.8
LINC01560Q8TB33 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LINC01560Q8TB33 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LINC01560Q8TB33 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LINC01560Q8TB33 AC131274.2-201ENST00000580697 1507 ntBASIC20.06■□□□□ 0.8
LINC01560Q8TB33 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LINC01560Q8TB33 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LINC01560Q8TB33 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LINC01560Q8TB33 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.05■□□□□ 0.8
LINC01560Q8TB33 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LINC01560Q8TB33 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
LINC01560Q8TB33 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.05■□□□□ 0.8
LINC01560Q8TB33 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.05■□□□□ 0.8
LINC01560Q8TB33 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
LINC01560Q8TB33 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
LINC01560Q8TB33 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
LINC01560Q8TB33 RARRES2P6-201ENST00000567333 442 ntBASIC20.05■□□□□ 0.8
LINC01560Q8TB33 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LINC01560Q8TB33 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC01560Q8TB33 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC01560Q8TB33 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LINC01560Q8TB33 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC01560Q8TB33 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.04■□□□□ 0.8
LINC01560Q8TB33 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.04■□□□□ 0.8
LINC01560Q8TB33 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.04■□□□□ 0.8
LINC01560Q8TB33 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.04■□□□□ 0.8
LINC01560Q8TB33 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LINC01560Q8TB33 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LINC01560Q8TB33 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC01560Q8TB33 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.04■□□□□ 0.8
LINC01560Q8TB33 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC01560Q8TB33 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
LINC01560Q8TB33 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC01560Q8TB33 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC01560Q8TB33 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LINC01560Q8TB33 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.03■□□□□ 0.8
LINC01560Q8TB33 DUX4L19-201ENST00000557448 1267 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms