Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH20Q8N6Y1 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDH20Q8N6Y1 TSPY9P-201ENST00000440215 945 ntBASIC23.56■■□□□ 1.36
PCDH20Q8N6Y1 TSPY11P-201ENST00000442607 1045 ntBASIC23.56■■□□□ 1.36
PCDH20Q8N6Y1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.56■■□□□ 1.36
PCDH20Q8N6Y1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
PCDH20Q8N6Y1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
PCDH20Q8N6Y1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
PCDH20Q8N6Y1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
PCDH20Q8N6Y1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH20Q8N6Y1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.55■■□□□ 1.36
PCDH20Q8N6Y1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.55■■□□□ 1.36
PCDH20Q8N6Y1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.55■■□□□ 1.36
PCDH20Q8N6Y1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDH20Q8N6Y1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH20Q8N6Y1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH20Q8N6Y1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH20Q8N6Y1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDH20Q8N6Y1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
PCDH20Q8N6Y1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDH20Q8N6Y1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDH20Q8N6Y1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.54■■□□□ 1.36
PCDH20Q8N6Y1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
PCDH20Q8N6Y1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.54■■□□□ 1.36
PCDH20Q8N6Y1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.54■■□□□ 1.36
PCDH20Q8N6Y1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDH20Q8N6Y1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDH20Q8N6Y1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
PCDH20Q8N6Y1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDH20Q8N6Y1 KRT16P3-201ENST00000439127 1283 ntBASIC23.53■■□□□ 1.36
PCDH20Q8N6Y1 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.53■■□□□ 1.36
PCDH20Q8N6Y1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH20Q8N6Y1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH20Q8N6Y1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH20Q8N6Y1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
PCDH20Q8N6Y1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
PCDH20Q8N6Y1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
PCDH20Q8N6Y1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH20Q8N6Y1 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH20Q8N6Y1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.35
PCDH20Q8N6Y1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDH20Q8N6Y1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
PCDH20Q8N6Y1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
PCDH20Q8N6Y1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.51■■□□□ 1.35
PCDH20Q8N6Y1 MTDHP2-201ENST00000601468 714 ntBASIC23.51■■□□□ 1.35
PCDH20Q8N6Y1 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDH20Q8N6Y1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDH20Q8N6Y1 AC022211.4-201ENST00000625094 2161 ntBASIC23.51■■□□□ 1.35
PCDH20Q8N6Y1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDH20Q8N6Y1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH20Q8N6Y1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
PCDH20Q8N6Y1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.5■■□□□ 1.35
PCDH20Q8N6Y1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH20Q8N6Y1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH20Q8N6Y1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.5■■□□□ 1.35
PCDH20Q8N6Y1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.5■■□□□ 1.35
PCDH20Q8N6Y1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.5■■□□□ 1.35
PCDH20Q8N6Y1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.5■■□□□ 1.35
PCDH20Q8N6Y1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH20Q8N6Y1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.5■■□□□ 1.35
PCDH20Q8N6Y1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH20Q8N6Y1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
PCDH20Q8N6Y1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.49■■□□□ 1.35
PCDH20Q8N6Y1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.49■■□□□ 1.35
PCDH20Q8N6Y1 SNX5-217ENST00000606557 1087 ntBASIC23.49■■□□□ 1.35
PCDH20Q8N6Y1 AC010997.5-201ENST00000609182 354 ntBASIC23.49■■□□□ 1.35
PCDH20Q8N6Y1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
PCDH20Q8N6Y1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.48■■□□□ 1.35
PCDH20Q8N6Y1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.48■■□□□ 1.35
PCDH20Q8N6Y1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.48■■□□□ 1.35
PCDH20Q8N6Y1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.48■■□□□ 1.35
PCDH20Q8N6Y1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PCDH20Q8N6Y1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDH20Q8N6Y1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH20Q8N6Y1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH20Q8N6Y1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH20Q8N6Y1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.47■■□□□ 1.35
PCDH20Q8N6Y1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.47■■□□□ 1.35
PCDH20Q8N6Y1 AC131212.1-201ENST00000613771 668 ntBASIC23.47■■□□□ 1.35
PCDH20Q8N6Y1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH20Q8N6Y1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.47■■□□□ 1.35
PCDH20Q8N6Y1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH20Q8N6Y1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH20Q8N6Y1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDH20Q8N6Y1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDH20Q8N6Y1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDH20Q8N6Y1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDH20Q8N6Y1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.46■■□□□ 1.35
PCDH20Q8N6Y1 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.46■■□□□ 1.35
PCDH20Q8N6Y1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
PCDH20Q8N6Y1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDH20Q8N6Y1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.45■■□□□ 1.34
PCDH20Q8N6Y1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.45■■□□□ 1.34
PCDH20Q8N6Y1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDH20Q8N6Y1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDH20Q8N6Y1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PCDH20Q8N6Y1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.45■■□□□ 1.34
PCDH20Q8N6Y1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.45■■□□□ 1.34
PCDH20Q8N6Y1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PCDH20Q8N6Y1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms