Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.63■■□□□ 1.53
TTC39CQ8N584 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TTC39CQ8N584 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TTC39CQ8N584 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TTC39CQ8N584 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TTC39CQ8N584 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
TTC39CQ8N584 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
TTC39CQ8N584 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.62■■□□□ 1.53
TTC39CQ8N584 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TTC39CQ8N584 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TTC39CQ8N584 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.62■■□□□ 1.53
TTC39CQ8N584 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.62■■□□□ 1.53
TTC39CQ8N584 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TTC39CQ8N584 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC24.62■■□□□ 1.53
TTC39CQ8N584 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
TTC39CQ8N584 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.61■■□□□ 1.53
TTC39CQ8N584 AC004448.1-201ENST00000458332 883 ntBASIC24.61■■□□□ 1.53
TTC39CQ8N584 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
TTC39CQ8N584 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TTC39CQ8N584 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
TTC39CQ8N584 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
TTC39CQ8N584 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
TTC39CQ8N584 AC131274.2-201ENST00000580697 1507 ntBASIC24.61■■□□□ 1.53
TTC39CQ8N584 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
TTC39CQ8N584 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
TTC39CQ8N584 LINC01124-201ENST00000409786 2117 ntBASIC24.6■■□□□ 1.53
TTC39CQ8N584 AC239859.2-201ENST00000444165 318 ntBASIC24.6■■□□□ 1.53
TTC39CQ8N584 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.6■■□□□ 1.53
TTC39CQ8N584 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.6■■□□□ 1.53
TTC39CQ8N584 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
TTC39CQ8N584 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
TTC39CQ8N584 MIR4787-201ENST00000607364 84 ntBASIC24.59■■□□□ 1.53
TTC39CQ8N584 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.59■■□□□ 1.53
TTC39CQ8N584 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TTC39CQ8N584 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TTC39CQ8N584 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TTC39CQ8N584 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
TTC39CQ8N584 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.58■■□□□ 1.53
TTC39CQ8N584 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.52
TTC39CQ8N584 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
TTC39CQ8N584 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TTC39CQ8N584 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
TTC39CQ8N584 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.57■■□□□ 1.52
TTC39CQ8N584 AC092028.1-203ENST00000608262 953 ntBASIC24.57■■□□□ 1.52
TTC39CQ8N584 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
TTC39CQ8N584 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TTC39CQ8N584 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TTC39CQ8N584 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.57■■□□□ 1.52
TTC39CQ8N584 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TTC39CQ8N584 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
TTC39CQ8N584 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TTC39CQ8N584 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TTC39CQ8N584 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.56■■□□□ 1.52
TTC39CQ8N584 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.56■■□□□ 1.52
TTC39CQ8N584 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TTC39CQ8N584 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.56■■□□□ 1.52
TTC39CQ8N584 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.56■■□□□ 1.52
TTC39CQ8N584 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
TTC39CQ8N584 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TTC39CQ8N584 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
TTC39CQ8N584 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TTC39CQ8N584 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.55■■□□□ 1.52
TTC39CQ8N584 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.55■■□□□ 1.52
TTC39CQ8N584 SNX5-217ENST00000606557 1087 ntBASIC24.55■■□□□ 1.52
TTC39CQ8N584 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TTC39CQ8N584 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TTC39CQ8N584 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.55■■□□□ 1.52
TTC39CQ8N584 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
TTC39CQ8N584 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TTC39CQ8N584 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.54■■□□□ 1.52
TTC39CQ8N584 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TTC39CQ8N584 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.54■■□□□ 1.52
TTC39CQ8N584 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TTC39CQ8N584 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.54■■□□□ 1.52
TTC39CQ8N584 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.54■■□□□ 1.52
TTC39CQ8N584 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TTC39CQ8N584 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TTC39CQ8N584 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
TTC39CQ8N584 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.53■■□□□ 1.52
TTC39CQ8N584 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.53■■□□□ 1.52
TTC39CQ8N584 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.53■■□□□ 1.52
TTC39CQ8N584 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.53■■□□□ 1.52
TTC39CQ8N584 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.53■■□□□ 1.52
TTC39CQ8N584 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TTC39CQ8N584 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TTC39CQ8N584 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TTC39CQ8N584 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TTC39CQ8N584 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
TTC39CQ8N584 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.52■■□□□ 1.52
TTC39CQ8N584 MIR6722-201ENST00000617286 78 ntBASIC24.52■■□□□ 1.52
TTC39CQ8N584 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.52■■□□□ 1.52
TTC39CQ8N584 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TTC39CQ8N584 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
TTC39CQ8N584 AC135731.1-201ENST00000569415 2548 ntBASIC24.52■■□□□ 1.52
TTC39CQ8N584 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.51■■□□□ 1.51
TTC39CQ8N584 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
TTC39CQ8N584 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.51■■□□□ 1.51
TTC39CQ8N584 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.51■■□□□ 1.51
TTC39CQ8N584 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.51■■□□□ 1.51
TTC39CQ8N584 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.51■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms