Protein–RNA interactions for Protein: Q8N1F7

NUP93, Nuclear pore complex protein Nup93, humanhuman

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93Q8N1F7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
NUP93Q8N1F7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.35■■□□□ 1.49
NUP93Q8N1F7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
NUP93Q8N1F7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
NUP93Q8N1F7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
NUP93Q8N1F7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.34■■□□□ 1.49
NUP93Q8N1F7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.34■■□□□ 1.49
NUP93Q8N1F7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
NUP93Q8N1F7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.34■■□□□ 1.49
NUP93Q8N1F7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
NUP93Q8N1F7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
NUP93Q8N1F7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
NUP93Q8N1F7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
NUP93Q8N1F7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
NUP93Q8N1F7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.33■■□□□ 1.49
NUP93Q8N1F7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
NUP93Q8N1F7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
NUP93Q8N1F7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
NUP93Q8N1F7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
NUP93Q8N1F7 AC004448.1-201ENST00000458332 883 ntBASIC24.33■■□□□ 1.49
NUP93Q8N1F7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.33■■□□□ 1.49
NUP93Q8N1F7 MIR6722-201ENST00000617286 78 ntBASIC24.33■■□□□ 1.49
NUP93Q8N1F7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.33■■□□□ 1.49
NUP93Q8N1F7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.33■■□□□ 1.49
NUP93Q8N1F7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.33■■□□□ 1.48
NUP93Q8N1F7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
NUP93Q8N1F7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.32■■□□□ 1.48
NUP93Q8N1F7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
NUP93Q8N1F7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.32■■□□□ 1.48
NUP93Q8N1F7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.32■■□□□ 1.48
NUP93Q8N1F7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.32■■□□□ 1.48
NUP93Q8N1F7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
NUP93Q8N1F7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
NUP93Q8N1F7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NUP93Q8N1F7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.31■■□□□ 1.48
NUP93Q8N1F7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
NUP93Q8N1F7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.31■■□□□ 1.48
NUP93Q8N1F7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NUP93Q8N1F7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
NUP93Q8N1F7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NUP93Q8N1F7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NUP93Q8N1F7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.3■■□□□ 1.48
NUP93Q8N1F7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.3■■□□□ 1.48
NUP93Q8N1F7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.3■■□□□ 1.48
NUP93Q8N1F7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
NUP93Q8N1F7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NUP93Q8N1F7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
NUP93Q8N1F7 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.29■■□□□ 1.48
NUP93Q8N1F7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.29■■□□□ 1.48
NUP93Q8N1F7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.29■■□□□ 1.48
NUP93Q8N1F7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.29■■□□□ 1.48
NUP93Q8N1F7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NUP93Q8N1F7 AC131274.2-201ENST00000580697 1507 ntBASIC24.29■■□□□ 1.48
NUP93Q8N1F7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NUP93Q8N1F7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.29■■□□□ 1.48
NUP93Q8N1F7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NUP93Q8N1F7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NUP93Q8N1F7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NUP93Q8N1F7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.28■■□□□ 1.48
NUP93Q8N1F7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.28■■□□□ 1.48
NUP93Q8N1F7 AL117332.1-201ENST00000622628 974 ntBASIC24.28■■□□□ 1.48
NUP93Q8N1F7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
NUP93Q8N1F7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
NUP93Q8N1F7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NUP93Q8N1F7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.28■■□□□ 1.48
NUP93Q8N1F7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
NUP93Q8N1F7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
NUP93Q8N1F7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
NUP93Q8N1F7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.27■■□□□ 1.48
NUP93Q8N1F7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.27■■□□□ 1.48
NUP93Q8N1F7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
NUP93Q8N1F7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
NUP93Q8N1F7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
NUP93Q8N1F7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.26■■□□□ 1.47
NUP93Q8N1F7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NUP93Q8N1F7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
NUP93Q8N1F7 MIR3621-201ENST00000580529 85 ntBASIC24.26■■□□□ 1.47
NUP93Q8N1F7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NUP93Q8N1F7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
NUP93Q8N1F7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
NUP93Q8N1F7 AP003733.4-201ENST00000623785 1697 ntBASIC24.26■■□□□ 1.47
NUP93Q8N1F7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NUP93Q8N1F7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NUP93Q8N1F7 HLA-L-211ENST00000482052 1765 ntBASIC24.26■■□□□ 1.47
NUP93Q8N1F7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.25■■□□□ 1.47
NUP93Q8N1F7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
NUP93Q8N1F7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
NUP93Q8N1F7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.25■■□□□ 1.47
NUP93Q8N1F7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
NUP93Q8N1F7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.25■■□□□ 1.47
NUP93Q8N1F7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.25■■□□□ 1.47
NUP93Q8N1F7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.25■■□□□ 1.47
NUP93Q8N1F7 AL356740.2-201ENST00000601559 647 ntBASIC24.25■■□□□ 1.47
NUP93Q8N1F7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
NUP93Q8N1F7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.25■■□□□ 1.47
NUP93Q8N1F7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.25■■□□□ 1.47
NUP93Q8N1F7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
NUP93Q8N1F7 AL022069.1-201ENST00000568025 1636 ntBASIC24.24■■□□□ 1.47
NUP93Q8N1F7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
NUP93Q8N1F7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms