Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC29.52■■■□□ 2.32
COL23A1Q86Y22 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
COL23A1Q86Y22 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC29.51■■■□□ 2.31
COL23A1Q86Y22 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
COL23A1Q86Y22 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
COL23A1Q86Y22 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.31
COL23A1Q86Y22 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC29.51■■■□□ 2.31
COL23A1Q86Y22 AL031602.1-201ENST00000633169 911 ntBASIC29.51■■■□□ 2.31
COL23A1Q86Y22 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC29.51■■■□□ 2.31
COL23A1Q86Y22 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
COL23A1Q86Y22 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.51■■■□□ 2.31
COL23A1Q86Y22 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC29.51■■■□□ 2.31
COL23A1Q86Y22 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
COL23A1Q86Y22 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
COL23A1Q86Y22 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
COL23A1Q86Y22 AK1-201ENST00000223836 736 ntTSL 3 BASIC29.5■■■□□ 2.31
COL23A1Q86Y22 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
COL23A1Q86Y22 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
COL23A1Q86Y22 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC29.5■■■□□ 2.31
COL23A1Q86Y22 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
COL23A1Q86Y22 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
COL23A1Q86Y22 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC29.5■■■□□ 2.31
COL23A1Q86Y22 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
COL23A1Q86Y22 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC29.5■■■□□ 2.31
COL23A1Q86Y22 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
COL23A1Q86Y22 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC29.49■■■□□ 2.31
COL23A1Q86Y22 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
COL23A1Q86Y22 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
COL23A1Q86Y22 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC29.48■■■□□ 2.31
COL23A1Q86Y22 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
COL23A1Q86Y22 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
COL23A1Q86Y22 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
COL23A1Q86Y22 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC29.48■■■□□ 2.31
COL23A1Q86Y22 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
COL23A1Q86Y22 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC29.47■■■□□ 2.31
COL23A1Q86Y22 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
COL23A1Q86Y22 DENND3-207ENST00000518347 850 ntTSL 2 BASIC29.47■■■□□ 2.31
COL23A1Q86Y22 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
COL23A1Q86Y22 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC29.47■■■□□ 2.31
COL23A1Q86Y22 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
COL23A1Q86Y22 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
COL23A1Q86Y22 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
COL23A1Q86Y22 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
COL23A1Q86Y22 HES6-206ENST00000409574 738 ntTSL 2 BASIC29.46■■■□□ 2.31
COL23A1Q86Y22 SLC47A1P1-202ENST00000449666 945 ntBASIC29.46■■■□□ 2.31
COL23A1Q86Y22 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC29.46■■■□□ 2.31
COL23A1Q86Y22 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
COL23A1Q86Y22 REST-206ENST00000612429 1376 ntTSL 5 BASIC29.46■■■□□ 2.31
COL23A1Q86Y22 REST-207ENST00000616975 1370 ntTSL 5 BASIC29.46■■■□□ 2.31
COL23A1Q86Y22 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
COL23A1Q86Y22 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
COL23A1Q86Y22 ID1-201ENST00000376105 1233 ntBASIC29.45■■■□□ 2.31
COL23A1Q86Y22 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC29.45■■■□□ 2.31
COL23A1Q86Y22 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC29.45■■■□□ 2.31
COL23A1Q86Y22 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC29.44■■■□□ 2.3
COL23A1Q86Y22 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC29.44■■■□□ 2.3
COL23A1Q86Y22 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
COL23A1Q86Y22 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
COL23A1Q86Y22 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC29.44■■■□□ 2.3
COL23A1Q86Y22 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
COL23A1Q86Y22 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC29.44■■■□□ 2.3
COL23A1Q86Y22 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
COL23A1Q86Y22 AC233992.3-201ENST00000607491 485 ntBASIC29.44■■■□□ 2.3
COL23A1Q86Y22 AC136469.2-201ENST00000623944 1028 ntBASIC29.44■■■□□ 2.3
COL23A1Q86Y22 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
COL23A1Q86Y22 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC29.43■■■□□ 2.3
COL23A1Q86Y22 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
COL23A1Q86Y22 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
COL23A1Q86Y22 DUX4L2-201ENST00000561772 1275 ntBASIC29.43■■■□□ 2.3
COL23A1Q86Y22 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC29.43■■■□□ 2.3
COL23A1Q86Y22 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC29.43■■■□□ 2.3
COL23A1Q86Y22 DUX4L6-201ENST00000626483 1275 ntBASIC29.43■■■□□ 2.3
COL23A1Q86Y22 DUX4L1-201ENST00000627662 1275 ntBASIC29.43■■■□□ 2.3
COL23A1Q86Y22 MPST-208ENST00000628507 698 ntTSL 5 BASIC29.43■■■□□ 2.3
COL23A1Q86Y22 DUX4L8-201ENST00000629013 1275 ntBASIC29.43■■■□□ 2.3
COL23A1Q86Y22 DUX4L3-201ENST00000630187 1275 ntBASIC29.43■■■□□ 2.3
COL23A1Q86Y22 DUX4L7-201ENST00000630678 1275 ntBASIC29.43■■■□□ 2.3
COL23A1Q86Y22 DUX4L5-201ENST00000630834 1275 ntBASIC29.43■■■□□ 2.3
COL23A1Q86Y22 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
COL23A1Q86Y22 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
COL23A1Q86Y22 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC29.42■■■□□ 2.3
COL23A1Q86Y22 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
COL23A1Q86Y22 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC29.42■■■□□ 2.3
COL23A1Q86Y22 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC29.42■■■□□ 2.3
COL23A1Q86Y22 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
COL23A1Q86Y22 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
COL23A1Q86Y22 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
COL23A1Q86Y22 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
COL23A1Q86Y22 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
COL23A1Q86Y22 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
COL23A1Q86Y22 AC004911.1-201ENST00000416316 871 ntBASIC29.41■■■□□ 2.3
COL23A1Q86Y22 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC29.41■■■□□ 2.3
COL23A1Q86Y22 AC009102.2-201ENST00000606772 1639 ntBASIC29.41■■■□□ 2.3
COL23A1Q86Y22 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
COL23A1Q86Y22 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
COL23A1Q86Y22 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC29.4■■■□□ 2.3
COL23A1Q86Y22 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
COL23A1Q86Y22 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
COL23A1Q86Y22 GRAMD4P2-201ENST00000423297 1097 ntBASIC29.39■■■□□ 2.3
COL23A1Q86Y22 YBX1P1-201ENST00000445822 960 ntBASIC29.39■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms