Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23■■□□□ 1.27
ZC3HC1Q86WB0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23■■□□□ 1.27
ZC3HC1Q86WB0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ZC3HC1Q86WB0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ZC3HC1Q86WB0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
ZC3HC1Q86WB0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
ZC3HC1Q86WB0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
ZC3HC1Q86WB0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23■■□□□ 1.27
ZC3HC1Q86WB0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ZC3HC1Q86WB0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ZC3HC1Q86WB0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.99■■□□□ 1.27
ZC3HC1Q86WB0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ZC3HC1Q86WB0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.99■■□□□ 1.27
ZC3HC1Q86WB0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
ZC3HC1Q86WB0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.99■■□□□ 1.27
ZC3HC1Q86WB0 DUSP8P5-201ENST00000422884 1815 ntBASIC22.98■■□□□ 1.27
ZC3HC1Q86WB0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ZC3HC1Q86WB0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.98■■□□□ 1.27
ZC3HC1Q86WB0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ZC3HC1Q86WB0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ZC3HC1Q86WB0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ZC3HC1Q86WB0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.98■■□□□ 1.27
ZC3HC1Q86WB0 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ZC3HC1Q86WB0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
ZC3HC1Q86WB0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.98■■□□□ 1.27
ZC3HC1Q86WB0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
ZC3HC1Q86WB0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ZC3HC1Q86WB0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.97■■□□□ 1.27
ZC3HC1Q86WB0 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.97■■□□□ 1.27
ZC3HC1Q86WB0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
ZC3HC1Q86WB0 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ZC3HC1Q86WB0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ZC3HC1Q86WB0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
ZC3HC1Q86WB0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ZC3HC1Q86WB0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ZC3HC1Q86WB0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ZC3HC1Q86WB0 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ZC3HC1Q86WB0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ZC3HC1Q86WB0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ZC3HC1Q86WB0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
ZC3HC1Q86WB0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
ZC3HC1Q86WB0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ZC3HC1Q86WB0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.95■■□□□ 1.26
ZC3HC1Q86WB0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
ZC3HC1Q86WB0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
ZC3HC1Q86WB0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ZC3HC1Q86WB0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
ZC3HC1Q86WB0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ZC3HC1Q86WB0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
ZC3HC1Q86WB0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.94■■□□□ 1.26
ZC3HC1Q86WB0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ZC3HC1Q86WB0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.94■■□□□ 1.26
ZC3HC1Q86WB0 ABHD17AP5-201ENST00000580133 923 ntBASIC22.94■■□□□ 1.26
ZC3HC1Q86WB0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.94■■□□□ 1.26
ZC3HC1Q86WB0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
ZC3HC1Q86WB0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
ZC3HC1Q86WB0 AC133561.1-201ENST00000568600 2415 ntBASIC22.93■■□□□ 1.26
ZC3HC1Q86WB0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.93■■□□□ 1.26
ZC3HC1Q86WB0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
ZC3HC1Q86WB0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ZC3HC1Q86WB0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ZC3HC1Q86WB0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ZC3HC1Q86WB0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
ZC3HC1Q86WB0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.93■■□□□ 1.26
ZC3HC1Q86WB0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.93■■□□□ 1.26
ZC3HC1Q86WB0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
ZC3HC1Q86WB0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ZC3HC1Q86WB0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
ZC3HC1Q86WB0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.92■■□□□ 1.26
ZC3HC1Q86WB0 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.92■■□□□ 1.26
ZC3HC1Q86WB0 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
ZC3HC1Q86WB0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.92■■□□□ 1.26
ZC3HC1Q86WB0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
ZC3HC1Q86WB0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
ZC3HC1Q86WB0 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ZC3HC1Q86WB0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
ZC3HC1Q86WB0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
ZC3HC1Q86WB0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ZC3HC1Q86WB0 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.91■■□□□ 1.26
ZC3HC1Q86WB0 AL161729.1-201ENST00000604104 1402 ntBASIC22.91■■□□□ 1.26
ZC3HC1Q86WB0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.91■■□□□ 1.26
ZC3HC1Q86WB0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.91■■□□□ 1.26
ZC3HC1Q86WB0 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.91■■□□□ 1.26
ZC3HC1Q86WB0 NTF6A-201ENST00000591175 560 ntBASIC22.91■■□□□ 1.26
ZC3HC1Q86WB0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.91■■□□□ 1.26
ZC3HC1Q86WB0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
ZC3HC1Q86WB0 AC068473.5-201ENST00000616428 2072 ntBASIC22.91■■□□□ 1.26
ZC3HC1Q86WB0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
ZC3HC1Q86WB0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
ZC3HC1Q86WB0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
ZC3HC1Q86WB0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ZC3HC1Q86WB0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
ZC3HC1Q86WB0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.9■■□□□ 1.26
ZC3HC1Q86WB0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
ZC3HC1Q86WB0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.9■■□□□ 1.26
ZC3HC1Q86WB0 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
ZC3HC1Q86WB0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.9■■□□□ 1.26
ZC3HC1Q86WB0 AC019171.1-201ENST00000601251 1056 ntBASIC22.9■■□□□ 1.26
ZC3HC1Q86WB0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.9■■□□□ 1.26
ZC3HC1Q86WB0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms