Protein–RNA interactions for Protein: Q53FZ2

ACSM3, Acyl-coenzyme A synthetase ACSM3, mitochondrial, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3Q53FZ2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACSM3Q53FZ2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ACSM3Q53FZ2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACSM3Q53FZ2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACSM3Q53FZ2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ACSM3Q53FZ2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACSM3Q53FZ2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACSM3Q53FZ2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.27■□□□□ 0.84
ACSM3Q53FZ2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACSM3Q53FZ2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.27■□□□□ 0.84
ACSM3Q53FZ2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.27■□□□□ 0.84
ACSM3Q53FZ2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ACSM3Q53FZ2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.27■□□□□ 0.84
ACSM3Q53FZ2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACSM3Q53FZ2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACSM3Q53FZ2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ACSM3Q53FZ2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.27■□□□□ 0.83
ACSM3Q53FZ2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ACSM3Q53FZ2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ACSM3Q53FZ2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.26■□□□□ 0.83
ACSM3Q53FZ2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
ACSM3Q53FZ2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACSM3Q53FZ2 AC233723.2-201ENST00000623798 2106 ntBASIC20.26■□□□□ 0.83
ACSM3Q53FZ2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.26■□□□□ 0.83
ACSM3Q53FZ2 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ACSM3Q53FZ2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ACSM3Q53FZ2 MIR3648-2-201ENST00000581792 180 ntBASIC20.26■□□□□ 0.83
ACSM3Q53FZ2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
ACSM3Q53FZ2 MIR3648-1-201ENST00000615959 180 ntBASIC20.26■□□□□ 0.83
ACSM3Q53FZ2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACSM3Q53FZ2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ACSM3Q53FZ2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ACSM3Q53FZ2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.26■□□□□ 0.83
ACSM3Q53FZ2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ACSM3Q53FZ2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACSM3Q53FZ2 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
ACSM3Q53FZ2 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ACSM3Q53FZ2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACSM3Q53FZ2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
ACSM3Q53FZ2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACSM3Q53FZ2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACSM3Q53FZ2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
ACSM3Q53FZ2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ACSM3Q53FZ2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.25■□□□□ 0.83
ACSM3Q53FZ2 AC060814.1-201ENST00000554326 538 ntBASIC20.25■□□□□ 0.83
ACSM3Q53FZ2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACSM3Q53FZ2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACSM3Q53FZ2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACSM3Q53FZ2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ACSM3Q53FZ2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACSM3Q53FZ2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACSM3Q53FZ2 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACSM3Q53FZ2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ACSM3Q53FZ2 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACSM3Q53FZ2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACSM3Q53FZ2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.23■□□□□ 0.83
ACSM3Q53FZ2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.23■□□□□ 0.83
ACSM3Q53FZ2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
ACSM3Q53FZ2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.23■□□□□ 0.83
ACSM3Q53FZ2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.23■□□□□ 0.83
ACSM3Q53FZ2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ACSM3Q53FZ2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.23■□□□□ 0.83
ACSM3Q53FZ2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ACSM3Q53FZ2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ACSM3Q53FZ2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ACSM3Q53FZ2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ACSM3Q53FZ2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ACSM3Q53FZ2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ACSM3Q53FZ2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ACSM3Q53FZ2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.22■□□□□ 0.83
ACSM3Q53FZ2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.21■□□□□ 0.83
ACSM3Q53FZ2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACSM3Q53FZ2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACSM3Q53FZ2 ANOS2P-203ENST00000472227 1816 ntBASIC20.21■□□□□ 0.83
ACSM3Q53FZ2 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ACSM3Q53FZ2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACSM3Q53FZ2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACSM3Q53FZ2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.21■□□□□ 0.83
ACSM3Q53FZ2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACSM3Q53FZ2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ACSM3Q53FZ2 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.21■□□□□ 0.83
ACSM3Q53FZ2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACSM3Q53FZ2 EP400NL-214ENST00000641289 2402 ntBASIC20.21■□□□□ 0.83
ACSM3Q53FZ2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ACSM3Q53FZ2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACSM3Q53FZ2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACSM3Q53FZ2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.2■□□□□ 0.82
ACSM3Q53FZ2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACSM3Q53FZ2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.2■□□□□ 0.82
ACSM3Q53FZ2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACSM3Q53FZ2 RP9P-202ENST00000450133 1212 ntBASIC20.2■□□□□ 0.82
ACSM3Q53FZ2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.2■□□□□ 0.82
ACSM3Q53FZ2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACSM3Q53FZ2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ACSM3Q53FZ2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACSM3Q53FZ2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.2■□□□□ 0.82
ACSM3Q53FZ2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACSM3Q53FZ2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ACSM3Q53FZ2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ACSM3Q53FZ2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms